Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021159
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF033823-1|AAD12718.1| 1189|Drosophila melanogaster moira protein.     31   1.5  
AY118495-1|AAM49864.1| 1002|Drosophila melanogaster LD06146p pro...    29   4.5  
AF071502-1|AAC28454.1| 1209|Drosophila melanogaster brahma assoc...    29   4.5  
AE014297-2128|AAF55259.3| 1209|Drosophila melanogaster CG18740-P...    29   4.5  
AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA...    29   5.9  

>AF033823-1|AAD12718.1| 1189|Drosophila melanogaster moira protein.
          Length = 1189

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 228 PLFWGLNNRSSSPTFWTIPRIFPVENSQCNP-EFLKTTCYRDRLPG 362
           P F+   N+S +P  +   R F ++  + NP E+L TT  R  L G
Sbjct: 453 PEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTTTACRRNLAG 498


>AY118495-1|AAM49864.1| 1002|Drosophila melanogaster LD06146p
           protein.
          Length = 1002

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 228 PLFWGLNNRSSSPTFWTIPRIFPVENSQCNP-EFLKTTCYRDRLPG 362
           P F+   N+S +P  +   R F ++  + NP E+L +T  R  L G
Sbjct: 266 PEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAG 311


>AF071502-1|AAC28454.1| 1209|Drosophila melanogaster brahma
           associated protein 155 kDa protein.
          Length = 1209

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 228 PLFWGLNNRSSSPTFWTIPRIFPVENSQCNP-EFLKTTCYRDRLPG 362
           P F+   N+S +P  +   R F ++  + NP E+L +T  R  L G
Sbjct: 473 PEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAG 518


>AE014297-2128|AAF55259.3| 1209|Drosophila melanogaster CG18740-PA
           protein.
          Length = 1209

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 228 PLFWGLNNRSSSPTFWTIPRIFPVENSQCNP-EFLKTTCYRDRLPG 362
           P F+   N+S +P  +   R F ++  + NP E+L +T  R  L G
Sbjct: 473 PEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAG 518


>AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA,
           isoform A protein.
          Length = 2030

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 375 ACPGVLGVDLGSTWFSEIPDYTGCFPPEKS 286
           ACP VL    GST +   P+YT  F  E+S
Sbjct: 263 ACPVVLKTATGSTGYMTEPEYTVVFTTEES 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,847,182
Number of Sequences: 53049
Number of extensions: 645653
Number of successful extensions: 1568
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)