Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021157
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    23   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.4  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 281 HKSTIPVLVWFH 246
           H S  PVLVW H
Sbjct: 69  HTSLYPVLVWIH 80


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 399  HHTACLVIKAFGRIIITNMFDRFAHNFLII 310
            HH    +IK+F  I    +   F  NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 299 LDVISPHKSTIPVLVWFH 246
           +++ +P   TIP+ VW H
Sbjct: 529 VNIWNPLTDTIPIHVWIH 546


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 224 DPDAKVACETKLKPVWCFCVAKS 292
           +P+ K   +  L P W +C   S
Sbjct: 178 EPEKKTESQPMLWPAWVYCTRYS 200


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2

Query: 136 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 41
           QK+ ++   + +S+G  VSI+  S   +E  +
Sbjct: 32  QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,361
Number of Sequences: 336
Number of extensions: 3898
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)