Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021156X
(466 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 33 0.10
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 33 0.10
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 33 0.10
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 33 0.10
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 28 2.9
U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical pr... 27 6.6
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 27 6.6
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 27 8.8
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 27 8.8
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 27 8.8
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 403 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLAL 284
+E K LR E E+ + RKE+D +RR++++ SQ + L
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVTL 608
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 403 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLAL 284
+E K LR E E+ + RKE+D +RR++++ SQ + L
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVTL 608
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 403 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLAL 284
+E K LR E E+ + RKE+D +RR++++ SQ + L
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVTL 608
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 33.1 bits (72), Expect = 0.10
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 403 EEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLAL 284
+E K LR E E+ + RKE+D +RR++++ SQ + L
Sbjct: 569 QEIKELRITLKSSEDELHRYRKEVDTLRRQISQNSQTVTL 608
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -1
Query: 439 EATEDLVGYTAAEEAKRLRAVNVKQEQEILQLRKELDEVRRE 314
E + L+ T+ EA + + K +E L++RKE++E+RRE
Sbjct: 175 ELEDRLLSITSESEA--ILKIKEKVVEENLRIRKEIEELRRE 214
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = -1
Query: 367 QEQEILQLRKELDEVRRELARVSQ 296
+EQ + +LRK++DE+ ++LA VS+
Sbjct: 797 EEQTVKKLRKKVDEMTKQLATVSR 820
>U40801-6|AAO91729.1| 450|Caenorhabditis elegans Hypothetical
protein F28E10.1d protein.
Length = 450
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 364 EQEILQLRKELDEVRRELARVSQVLA 287
E+E+ +LR+E +++RRELA +A
Sbjct: 416 EEELTRLRRENEQLRRELAERDATIA 441
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical protein
F28E10.1a protein.
Length = 1134
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 364 EQEILQLRKELDEVRRELARVSQVLA 287
E+E+ +LR+E +++RRELA +A
Sbjct: 1100 EEELTRLRRENEQLRRELAERDATIA 1125
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 26.6 bits (56), Expect = 8.8
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = -1
Query: 364 EQEILQLRKELDEVRRELARVSQV 293
E++++++R+E D + E+AR+ Q+
Sbjct: 178 EEDVIRIRRENDGIYNEIARIKQL 201
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 26.6 bits (56), Expect = 8.8
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = -1
Query: 364 EQEILQLRKELDEVRRELARVSQV 293
E++++++R+E D + E+AR+ Q+
Sbjct: 804 EEDVIRIRRENDGIYNEIARIKQL 827
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 26.6 bits (56), Expect = 8.8
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = -1
Query: 364 EQEILQLRKELDEVRRELARVSQV 293
E++++++R+E D + E+AR+ Q+
Sbjct: 804 EEDVIRIRRENDGIYNEIARIKQL 827
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -1
Query: 118 AEEPGRIV*SPCRRICCTGCGTVISATDDIGEKEDAWP 5
A+EP R+ PC +CC CG D D P
Sbjct: 363 ADEPRRVC--PCLFVCCCCCGCCFEEGDSTEGSIDVSP 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,919,577
Number of Sequences: 27780
Number of extensions: 127514
Number of successful extensions: 454
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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