Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021154
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 124 8e-29
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 122 2e-28
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 121 4e-28
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 118 4e-27
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 113 1e-25
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 95 4e-20
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 89 4e-18
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 0.76
06_03_0382 - 20142830-20144329 30 1.8
02_04_0610 + 24335153-24337724,24337835-24338256 29 3.1
03_06_0416 - 33780911-33781861 29 4.1
04_04_1685 - 35355952-35356141,35357285-35357361 28 5.4
04_03_0053 - 10286076-10286516,10286560-10287586,10287756-102880... 28 5.4
12_02_0399 - 18600444-18600591,18600626-18601656 28 7.1
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 28 7.1
09_02_0034 + 3151850-3152341 27 9.4
04_01_0009 - 178579-178638,179151-179246,179504-179565,180181-18... 27 9.4
03_06_0615 + 35118336-35120402 27 9.4
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386... 27 9.4
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 124 bits (298), Expect = 8e-29
Identities = 50/85 (58%), Positives = 69/85 (81%)
Frame = +2
Query: 254 INKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIH 433
+ +YI +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++
Sbjct: 85 LQRYIAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLK 144
Query: 434 DKGHVYDVLKNWPETDVRAIVVTDG 508
DKG + +VLKNWPE ++ IVVTDG
Sbjct: 145 DKGKILEVLKNWPERSIQVIVVTDG 169
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
+RILGLGDLG GMGIPVGKL+LYTALGG++P CLPITID
Sbjct: 170 ERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITID 210
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 122 bits (294), Expect = 2e-28
Identities = 49/91 (53%), Positives = 72/91 (79%)
Frame = +2
Query: 236 RQIRKSINKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRG 415
RQ + +Y+ +M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+G
Sbjct: 148 RQYSVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQG 207
Query: 416 LFITIHDKGHVYDVLKNWPETDVRAIVVTDG 508
L++++ DKG V DVL+NWPE +++ IVVTDG
Sbjct: 208 LYVSLKDKGKVLDVLRNWPERNIQVIVVTDG 238
Score = 74.9 bits (176), Expect = 5e-14
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
+RILGLGDLG GMGIPVGKL+LYTALGG++P CLPITID
Sbjct: 239 ERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITID 279
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 121 bits (292), Expect = 4e-28
Identities = 48/91 (52%), Positives = 72/91 (79%)
Frame = +2
Query: 236 RQIRKSINKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRG 415
RQ + + +Y+ LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+G
Sbjct: 82 RQFQVPLQRYMALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQG 141
Query: 416 LFITIHDKGHVYDVLKNWPETDVRAIVVTDG 508
L+I++ +KG + ++L+NWPE ++ IVVTDG
Sbjct: 142 LYISLKEKGRILELLRNWPEKSIQVIVVTDG 172
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = +1
Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
+RILGLGDLG GMGIPVGKLALYTALGG++P CLPITID
Sbjct: 173 ERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITID 213
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 118 bits (284), Expect = 4e-27
Identities = 48/91 (52%), Positives = 70/91 (76%)
Frame = +2
Query: 236 RQIRKSINKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRG 415
RQ + + KY+ +M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+G
Sbjct: 102 RQYQLPLQKYMAMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQG 161
Query: 416 LFITIHDKGHVYDVLKNWPETDVRAIVVTDG 508
L+I++ +KG + +VLKNWPE ++ IVVTDG
Sbjct: 162 LYISLKEKGKILEVLKNWPERSIQVIVVTDG 192
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIKP 603
+RILGLGDLG GMGIPVGKLALYTALGG++P
Sbjct: 193 ERILGLGDLGCQGMGIPVGKLALYTALGGVRP 224
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 129 GHGFYHRRASLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPL 257
G F R + GLLPP + +QE Q +I +Y+ PL
Sbjct: 66 GLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPL 108
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 113 bits (271), Expect = 1e-25
Identities = 44/74 (59%), Positives = 62/74 (83%)
Frame = +2
Query: 287 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 466
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 467 WPETDVRAIVVTDG 508
WPE ++ IV+TDG
Sbjct: 65 WPERSIQVIVITDG 78
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIK 600
+RILGLGDLG GMGIPVGKL+LYTALGG++
Sbjct: 79 ERILGLGDLGCQGMGIPVGKLSLYTALGGVR 109
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/87 (45%), Positives = 59/87 (67%)
Frame = +2
Query: 251 SINKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITI 430
++ K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++ +
Sbjct: 109 ALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMYFSA 168
Query: 431 HDKGHVYDVLKNWPETDVRAIVVTDGN 511
DKG + ++ NWP V IVVTDG+
Sbjct: 169 KDKGEMMSMIYNWPAEKVDMIVVTDGS 195
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +1
Query: 511 RILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
RILGLGDLG G+GIP+GKL +Y A GI P + LPI +D
Sbjct: 196 RILGLGDLGVQGIGIPIGKLDVYVAAAGINPQKVLPIMLD 235
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 162 LGIHGLLPPRVKTQEEQVE 218
LG+ GLLPPRV + E+Q +
Sbjct: 69 LGLRGLLPPRVMSFEQQYD 87
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 KYIYLMGLLDRNEHLFYR--FVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIH 433
K+ L L DRNE ++Y+ + DN+ E PIVYTPTVGL CQ + ++RRPRG++ +
Sbjct: 147 KWRILNRLHDRNETMYYKAEVLIDNIEEHAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAE 206
Query: 434 DKGHVYDVLKNWPETDVRAIVVTDGN 511
D+G + ++ NWP V IVVTDG+
Sbjct: 207 DRGEMMSMVYNWPADQVDMIVVTDGS 232
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +1
Query: 511 RILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
RILGLGDLG G+GI +GKL LY A GI P + LP+ ID
Sbjct: 233 RILGLGDLGVHGIGIAIGKLDLYVAAAGINPQRVLPVMID 272
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 129 GHGFYHRRASLLGIHGLLPPRVKTQEEQVE 218
G GF LG+ GLLPP V + ++Q++
Sbjct: 57 GTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 131 PLLRPGCLRWSRPERPL--VGCPSPEPXNPIRSRSIS 27
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>06_03_0382 - 20142830-20144329
Length = 499
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 575 SASLPTGMPIPHAPKSPRPR 516
SASLP +P+P P+ PRP+
Sbjct: 340 SASLPLPLPLPPRPRMPRPK 359
>02_04_0610 + 24335153-24337724,24337835-24338256
Length = 997
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = -3
Query: 576 EREFAHWDAHPACAQVAKTQNTFPSVTTMARTSVSGQFLRTSYTCPLSWIVMKRPLGRRY 397
ER H D P + N + ++ + +F ++CP S I +K +G Y
Sbjct: 797 ERSIIHCDLKPMNILLDSDMNAYLGDFGISSLVLESKFASLGHSCPNSLIGLKGTIG--Y 854
Query: 396 TSPNF*QA--RPTVG-VYTIGIISATLSATKR 310
+P + + T G VY GI+ + KR
Sbjct: 855 IAPEYAECGNASTYGDVYGFGIVLLEMLTGKR 886
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 419 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 276
R P GGT +R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>04_04_1685 - 35355952-35356141,35357285-35357361
Length = 88
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 485 RAIVVTDGNVFWVLATWAHAGWASQWANSRSTPRS---EASSRISVCPSLST 631
R +VT G+ W +A WA S ++P + + ISVCP + T
Sbjct: 15 RESIVTIGSDGWCVAPWAPETPVQNGDGSNTSPDAGDGDGEREISVCPGVGT 66
>04_03_0053 -
10286076-10286516,10286560-10287586,10287756-10288096,
10288198-10288248
Length = 619
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 440 GHVYDVLKNWPETDVRAIVVTDGNVFWVLATWAHAGWASQWANSRSTPRSEAS 598
G++Y L N +V G +W+L TW + G A + N S +E S
Sbjct: 201 GYLYQTLNNASAKIAVGSIVGAGGPWWLLQTWLNLG-AMKAVNRPSVTEAEFS 252
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 431 HDKGHVYDVLKNWPETDVR--AIVVTDGNVFWVLATWAHAGW 550
HDKGH+ D +K W R + +++ + V T A W
Sbjct: 216 HDKGHLQDAVKRWAFDQKREFRVKISNRTTYDVKCTQAGCPW 257
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 170 YAQE*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPXNPIRS 39
+ Q SS K +PL RP SRPE P S P P S
Sbjct: 216 FPQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>09_02_0034 + 3151850-3152341
Length = 163
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 491 IVVTDGNVFWVLATWAHAGWASQWANSRST 580
I V D V A W HAG S W RST
Sbjct: 77 IAVADAVVRLPCAHWYHAGCISPWLGIRST 106
>04_01_0009 -
178579-178638,179151-179246,179504-179565,180181-180245,
181271-181363,181489-181592,182070-182153,182223-182303,
182829-182880,183048-183119,183411-183486,183568-183680,
184056-184203,184295-184372,184511-184640,184733-184923,
187039-187099,187201-187371
Length = 578
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 286 QEPHKIDVLVNGFSYLSIESLHSSTCSSCVLTRGGNNPCMPKS 158
+ PH ID G S + S CS+ + T GG + +P S
Sbjct: 263 RNPHSIDRYTGGSSSGPAALVSSGLCSAAIGTDGGGSVRIPSS 305
>03_06_0615 + 35118336-35120402
Length = 688
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 475 LRPVLKNIVYMSLIVDRDE-EAPWSAVHKPELLTGQANR 362
L P +VY+S V E + W+AV+ EL TG+ R
Sbjct: 139 LTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRR 177
>03_02_0792 +
11236785-11237337,11237711-11238261,11238446-11238628,
11238768-11238966,11239055-11239761
Length = 730
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 490 GTDVRLRPVLKNIVYMSLIVD-RDEEAPWSAVHKPELLTGQANR 362
G +V R V +VY+S R+ +PW+ +K L TG+ R
Sbjct: 137 GYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETER 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,140,115
Number of Sequences: 37544
Number of extensions: 489653
Number of successful extensions: 1718
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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