Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021154
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical...   118   3e-27
Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z81066-2|CAB02971.1|  239|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z67738-1|CAA91545.2|  352|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    27   8.4  
AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical ...    27   8.4  
AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AL110490-11|CAB54452.1|  620|Caenorhabditis elegans Hypothetical
           protein Y48B6A.12 protein.
          Length = 620

 Score =  118 bits (284), Expect = 3e-27
 Identities = 54/93 (58%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
 Frame = +2

Query: 236 RQIRKSINKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRG 415
           RQ   ++ KYI L  L DRNE L+YR + DNV E+MPIVYTPTVG ACQ FG +YR P+G
Sbjct: 99  RQQPDNLAKYIQLDSLQDRNEKLYYRVLCDNVKELMPIVYTPTVGQACQHFGFIYRNPKG 158

Query: 416 LFITIHDK--GHVYDVLKNWPETDVRAIVVTDG 508
           L+ITI+D     ++ +L NWP  +VRAIV+TDG
Sbjct: 159 LYITINDNSISKIHQILANWPTENVRAIVITDG 191



 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +1

Query: 508 KRILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITID 630
           +RILGLGDLG  G+GIPVGKLALY AL GI+P  CLP+ +D
Sbjct: 192 ERILGLGDLGTYGIGIPVGKLALYVALAGIRPEWCLPVILD 232



 Score = 36.7 bits (81), Expect = 0.014
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +1

Query: 94  GLDHLKHPGLNKGMAFTIEER 156
           G+D LK PGLNKGMAF++ ER
Sbjct: 51  GIDLLKSPGLNKGMAFSLHER 71



 Score = 31.5 bits (68), Expect = 0.52
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 129 GHGFYHRRASLLGIHGLLPPRVKTQEEQ 212
           G  F       LG+HGLLPP   T+E+Q
Sbjct: 63  GMAFSLHERQYLGVHGLLPPAFMTEEQQ 90


>Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical
           protein R07B7.11 protein.
          Length = 451

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +1

Query: 22  YSEMERDRIGLXGSGDGQPTSGLSGLDHLKHP-GLNKGMAFTIEERHSWAYTGCYHHE 192
           +SEMERD  G+  +   +  SG+  L    H  GL  G+      +    Y G Y HE
Sbjct: 79  WSEMERDSHGILVANKTRFPSGMKALAKYMHDRGLKFGIYEDYGTKTCGGYPGSYKHE 136


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 TSILWGSWTAMSICSTVS 317
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 TSILWGSWTAMSICSTVS 317
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 TSILWGSWTAMSICSTVS 317
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 264 TSILWGSWTAMSICSTVS 317
           TS +WG W A S C TV+
Sbjct: 52  TSAIWGDWGAWSTCPTVT 69


>Z81066-2|CAB02971.1|  239|Caenorhabditis elegans Hypothetical
           protein F17B5.3 protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 459 RTSYTCPLSWIVMKRPLGR 403
           R + TCP  WI  +RP GR
Sbjct: 66  RPTRTCPRDWITFERPQGR 84


>Z67738-1|CAA91545.2|  352|Caenorhabditis elegans Hypothetical
           protein W03G11.2 protein.
          Length = 352

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
 Frame = -2

Query: 397 HKPELLTGQANRRSVHNWHHFSHVIRDETVEQMLIAVQEPHKIDVLV-NGFSYLSIESLH 221
           HK  +   +       +W  F H ++ + +E  +  V + + I + V     +L I  L 
Sbjct: 6   HKDVIFNDELEENEKFSWDEFVHKLKQQQLEGQVPVVSKRYAISITVFFALLFLGISQLL 65

Query: 220 SSTCSSCVLTR 188
           +S     +L R
Sbjct: 66  ASANEKVILIR 76


>Z83106-1|CAB05493.1|  359|Caenorhabditis elegans Hypothetical
           protein F22B8.1 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +3

Query: 258 TSTSILWGSWTAMSICSTVS 317
           TS ++LW SW+A+ I +T+S
Sbjct: 202 TSPAVLWKSWSAILILTTLS 221


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/43 (27%), Positives = 17/43 (39%)
 Frame = -3

Query: 534 QVAKTQNTFPSVTTMARTSVSGQFLRTSYTCPLSWIVMKRPLG 406
           Q+  T     + TT   T+ +     T   CP  W   +RP G
Sbjct: 21  QIETTSAPITTTTTTTTTTTTSTTTTTPIPCPTGWEQFERPSG 63


>AF039720-6|AAB96700.1|  347|Caenorhabditis elegans Hypothetical
           protein F33D11.7 protein.
          Length = 347

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/58 (24%), Positives = 21/58 (36%)
 Frame = +1

Query: 112 HPGLNKGMAFTIEERHSWAYTGCYHHESRRKRSRLNYASSRSTDTKIH*QVHLSYGAL 285
           H  +NK         H W Y G   H  R   S++ ++     +   +  V L  G L
Sbjct: 197 HQYMNKDGTLKPPSAHPWKYVGSLRHMPRAAFSKVEFSRMEDLEMWFYMSVELVKGCL 254


>AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical
           protein M151.3 protein.
          Length = 836

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 363 VGVYTIGIISATLSATKR*NRCSLRSKSPIR*MYLLMDFRICRSRACIVQPAPL 202
           V V+ I  +   + AT+  N  SL  KS +   +LL DF        ++QP P+
Sbjct: 432 VDVHNISQLQLQIKATQELNTDSLPLKSRMNQDFLLQDFSHLNGLNPMLQPLPM 485


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,971,152
Number of Sequences: 27780
Number of extensions: 377049
Number of successful extensions: 1187
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)