Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021152X
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 32 0.25
01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136 30 1.3
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 1.8
12_01_0572 + 4684050-4684243,4684332-4684426,4684686-4685404 29 2.3
09_02_0396 - 8540532-8540549,8540656-8542129,8542217-8543121 29 2.3
07_03_0163 + 14588041-14588266,14588835-14589001,14589880-145900... 29 2.3
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 29 2.3
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 29 2.3
01_02_0057 - 10691403-10691420,10691525-10692998,10693086-10693990 29 2.3
07_03_0584 - 19690474-19690589,19690763-19690909,19691068-196911... 28 4.1
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281 28 4.1
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 28 4.1
11_02_0068 + 7991816-7992603,7995209-7997177 27 7.2
05_04_0226 + 19215091-19215172,19215281-19215394,19215508-192155... 27 7.2
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 27 7.2
02_02_0520 + 11152718-11153600,11153736-11153917,11154160-111542... 27 7.2
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371... 27 9.5
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVV 363
L+ L+D +A +DK++ ES+NS ++ E++T + V
Sbjct: 493 LKKLSDDMAMEVDKLKCAESQNSAMQSELETLDQKV 528
>01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136
Length = 505
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -2
Query: 300 YFIDIGSQPVVEIL*SSFSCKRLCLVGLSGLLGRPAELEGRLPTGVLD 157
+F S P+ E+ S S + + ++ L G+ +E+E R+P GVL+
Sbjct: 232 HFFLHSSTPLTELRMSQCSYQLIAVLALQGMEAFRSEVEKRMPNGVLE 279
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGM 393
L++L + + +++Q + E +RR + E T VS I+GM
Sbjct: 2121 LESLRENIIELQSEIKQRDEEILSMRRNLSLLYEACTSSVSEIEGM 2166
>12_01_0572 + 4684050-4684243,4684332-4684426,4684686-4685404
Length = 335
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 437 YHLTVFLASWSSCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNW 303
YH+ ++LA+ + + + S V++ +VC+S NP S SN+
Sbjct: 276 YHVEIYLAAIDAI-LVEMNHRFSEVSSELLVCMSSLNPHNSFSNF 319
>09_02_0396 - 8540532-8540549,8540656-8542129,8542217-8543121
Length = 798
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 437 YHLTVFLASWSSCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNW 303
YH+ ++LA+ + + + S V++ +VC+S NP S SN+
Sbjct: 603 YHVEIYLAAIDAI-LVEMNHRFSEVSSELLVCMSSLNPRNSFSNF 646
>07_03_0163 +
14588041-14588266,14588835-14589001,14589880-14590068,
14590193-14590315,14590531-14590793,14590882-14590976,
14591529-14591965,14592461-14592481
Length = 506
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 437 YHLTVFLASWSSCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNW 303
YH+ ++LA+ + + + S V++ +VC+S NP S SN+
Sbjct: 440 YHVEIYLAAIDAI-LVEMNHHFSEVSSELLVCMSSLNPRNSFSNF 483
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 289 IDKVRQLESENSGLRREIQTTQEVVTR--EVSNIKGMYEHELQDAR 420
++ +R+LE ENSGL+ E++ R E+ + E E+ D +
Sbjct: 272 VEHIRKLEEENSGLKLELEKANVAEQRAVELEGVVEQLEVEIADVK 317
>02_01_0055 +
410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 262 NLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVT 366
NL+ RL+AY VR+L + + +++I TQ +VT
Sbjct: 590 NLSARLSAYGITVRELSGDQNLTKQQIDETQIIVT 624
>01_02_0057 - 10691403-10691420,10691525-10692998,10693086-10693990
Length = 798
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 437 YHLTVFLASWSSCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNW 303
YH+ ++LA+ + + + S V++ +VC+S NP S SN+
Sbjct: 603 YHVEIYLAAIDAI-LVEMNHRFSEVSSELLVCMSSLNPRNSFSNF 646
>07_03_0584 -
19690474-19690589,19690763-19690909,19691068-19691116,
19691240-19691365,19691473-19692651
Length = 538
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 446 EKAKLEIDLKRLYEENDDLKK 508
+KAKL+ID+ +L E DDLKK
Sbjct: 392 KKAKLDIDILQLDAEVDDLKK 412
>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
Length = 518
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 42 CQSLLL*QKCIPLSIQKQEKL*HLHQMLVLCHQSKA 149
C L+L Q+ +P+S+ Q+ H++Q + C Q++A
Sbjct: 206 CNGLVL-QQLVPVSLSTQQDQQHMNQATLYCMQTQA 240
>05_01_0168 +
1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -2
Query: 480 NLFKSISSLAFSRDVSSNSIPGILEFMLVHSFNVGNLAGDHLLCGLYFTT 331
+L K +S FSR + S+ +P F V S ++ +LAG +L G YF +
Sbjct: 508 DLCKQLSD--FSRQLLSDELPSTSTFEFVQSGSIKHLAG-YLSNGTYFNS 554
>11_02_0068 + 7991816-7992603,7995209-7997177
Length = 918
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 295 KVRQLESENSGLRREIQTTQEVVTREVSNI 384
KVR+L +N G++ I T+ +VT +V ++
Sbjct: 519 KVRRLSIQNGGIQENIVTSTHLVTSQVRSL 548
>05_04_0226 +
19215091-19215172,19215281-19215394,19215508-19215590,
19215682-19215820,19215862-19216191,19216414-19216693,
19216795-19216956,19217134-19217349,19217458-19217495,
19217597-19217760,19217833-19217946,19218042-19218083,
19218180-19218983
Length = 855
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 274 RLAAYIDKVRQLESENSGLRREIQTTQ-EVVTREVSNIKGMYEHELQDARNTVR*YISR 447
+L +K+R E EN+ L +Q TQ + +RE N+ + ++++A T + Y R
Sbjct: 532 KLKQMTEKIRHEEKENAKLLESLQLTQLKYASRE--NVIKTLQEKIREAEQTSKTYQQR 588
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 247 ER*LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 405
E L++ L A + ++L EN+ L +++Q + + E SN++ +YE E
Sbjct: 719 EEELKSCKKELDASKELSKKLTMENNLLDQKVQRLERAKSEEKSNMERVYEDE 771
>02_02_0520 +
11152718-11153600,11153736-11153917,11154160-11154249,
11154343-11154627,11154776-11154994,11155112-11155339
Length = 628
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 407 SKMPGILLDDTSREKAKLEIDLKRLYEENDDLKKA*TRRQKT 532
SK + T E+ KLE ++K+ E+ND + A +QK+
Sbjct: 332 SKQLSKFVAQTDIERRKLESEMKKNSEQNDSIHMARIEQQKS 373
>12_01_1022 -
10435409-10435564,10435950-10436219,10436820-10437125,
10437932-10438057,10439825-10439893,10440443-10440487,
10440717-10440776,10441527-10441589,10442186-10442266,
10442494-10442916
Length = 532
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 361 PPPVWFVFHDVIPNSHSPTGVLYRY 287
PPP W +H V N + P GV +++
Sbjct: 382 PPPEWNGYHQVPLNPYYPPGVPFQH 406
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,749,857
Number of Sequences: 37544
Number of extensions: 249983
Number of successful extensions: 627
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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