Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021152X
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.40 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   3.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   3.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRRE 339
           LQN+  +L   ++++R    EN+ LRRE
Sbjct: 110 LQNIGAQLTTALEELRLCREENAALRRE 137


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 471 KSISSLAFSRDVSSNSIPGILEFMLVHSFNVG 376
           K +  + + RDV  N +  +L+FM     NVG
Sbjct: 111 KHLHPIIYLRDVEVNEMRALLDFMYQGEVNVG 142


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 256  LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQE---VVTREVSNIKGMYEHELQDARNT 426
            ++ +    AA+   V Q+E E +  RRE+Q   +    + + ++NI+   E  ++  R T
Sbjct: 880  IELMKQEKAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIANIESRIE-SMKSKRQT 938

Query: 427  V 429
            +
Sbjct: 939  I 939


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 456 LAFSRDVSSNSIPGILEFMLVHSFNVG 376
           + + RDV  N +  +L+FM     NVG
Sbjct: 116 IIYLRDVEVNEMRALLDFMYQGEVNVG 142


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 456 LAFSRDVSSNSIPGILEFMLVHSFNVG 376
           + + RDV  N +  +L+FM     NVG
Sbjct: 116 IIYLRDVEVNEMRALLDFMYQGEVNVG 142


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 456 LAFSRDVSSNSIPGILEFMLVHSFNVG 376
           + + RDV  N +  +L+FM     NVG
Sbjct: 68  IIYLRDVEVNEMRALLDFMYQGEVNVG 94


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +2

Query: 311  RVRIRDYVV--KYKPHRRWSPARF--PTLKECTSMNSKMP 418
            R R+ D ++  K++PH  W P  +  P   E T +++K+P
Sbjct: 1732 RKRLGDCMIAAKFEPHDNWLPPCYYVPKELEQTLIDAKIP 1771


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = +1

Query: 226 QAKPFARER*LQNLNDRLAAYIDKVRQLESENSGLRR----EIQTTQEVVTREVSNIK 387
           QAK  A ER ++N ++R+       RQ+E +     R    +++  ++ V  E + +K
Sbjct: 395 QAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLK 452


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 383  LKECTSMNSKMPGILLDDTSREKAKLEIDLKRLYEENDDLKK 508
            + ECT   + +  +   D S +K  L+   K L + N  LKK
Sbjct: 936  IDECTEKIAGLGALPNVDASYQKMSLKSLFKELEKANQHLKK 977


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -1

Query: 358 PPVWFVFHDVIPNSHSPTGVLYRYRQPTCR*DFVII 251
           P  WF FH +  +      ++Y Y     R  F+++
Sbjct: 546 PYFWFAFHWLAMSHSCYNPIIYCYMNARFRSGFILV 581


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,480
Number of Sequences: 2352
Number of extensions: 9322
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)