Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021152X
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical pr... 50 8e-07
X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein. 50 8e-07
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 49 2e-06
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 49 2e-06
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 48 3e-06
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 48 3e-06
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 48 3e-06
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 48 6e-06
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 48 6e-06
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 44 7e-05
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 44 7e-05
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 44 7e-05
U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate fi... 38 0.003
U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate fi... 38 0.003
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 38 0.005
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 38 0.005
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 38 0.005
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 35 0.043
X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic int... 33 0.099
AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate... 33 0.099
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical pr... 29 1.6
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 29 2.8
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 3.7
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 3.7
Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 28 3.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 4.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 4.9
AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 65 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 122
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 73 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 130
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 73 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 130
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 65 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 122
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 73 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 130
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/58 (41%), Positives = 38/58 (65%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL DA+ +
Sbjct: 73 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLI 130
>Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical
protein DY3.2 protein.
Length = 566
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 405
L +LN RLA YIDKVRQLE EN+ L+ +I+ + V +E SN+ +E E
Sbjct: 49 LTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSNLADRFEAE 98
>X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein.
Length = 566
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHE 405
L +LN RLA YIDKVRQLE EN+ L+ +I+ + V +E SN+ +E E
Sbjct: 49 LTSLNSRLATYIDKVRQLEQENNRLQVQIRDIEVVEKKEKSNLADRFEAE 98
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ LNDRLA+YI+KVR L+++N L +++ Q + ++K MYE E+ A N V+
Sbjct: 75 IMELNDRLASYIEKVRFLDAQNRKLDADLKMLQGRFGKSTGSVKVMYEMEITTATNVVK 133
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ LNDRLA+YI+KVR L+++N L +++ Q + ++K MYE E+ A N V+
Sbjct: 75 IMELNDRLASYIEKVRFLDAQNRKLDADLKMLQGRFGKSTGSVKVMYEMEITTATNVVK 133
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHEL 408
+ +LNDRLA+YI+KVR LE++N L ++ + ++ NI+ MYE EL
Sbjct: 91 MSDLNDRLASYIEKVRFLEAQNRKLAADLDALRSKWGKDTHNIRNMYEGEL 141
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ LNDRLA+YI+KVR LE++N + +++ + + +++K MYE EL+ A++ +
Sbjct: 74 MSELNDRLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDLI 131
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
+ LNDRLA+YI+KVR LE++N + +++ + + +++K MYE EL+ A++ +
Sbjct: 55 MSELNDRLASYIEKVRFLEAQNRKMEKDLNLLRGKWGHDSTSVKVMYETELRSAKDLI 112
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ LNDRLA+YI KVR L ++N L ++ Q + ++K MYE E+ A N V+
Sbjct: 75 ITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNVVK 133
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ LNDRLA+YI KVR L ++N L ++ Q + ++K MYE E+ A N V+
Sbjct: 75 ITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNVVK 133
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ LNDRLA+YI KVR L ++N L ++ Q + ++K MYE E+ A N V+
Sbjct: 75 ITELNDRLASYIGKVRFLAAQNRKLEADLNVLQSRFGKSTGSVKIMYEMEITTATNVVK 133
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
LQ LNDRL YID+V++LE +N L ++ + ++ S IK Y L AR +
Sbjct: 54 LQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDI 111
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
LQ LNDRL YID+V++LE +N L ++ + ++ S IK Y L AR +
Sbjct: 54 LQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDI 111
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTV 429
LQ LNDRL YID+V++LE +N L ++ + ++ S IK Y L AR +
Sbjct: 85 LQGLNDRLGNYIDRVKKLEEQNRKLVADLDELRGKWGKDTSEIKIKYSESLSTARKDI 142
>U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate
filament, d protein1, isoform b protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 247 ER*LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNT 426
+R + +LN+RLA Y++KVR LE++N L +I ++ ++ Y+ E
Sbjct: 54 KREIADLNNRLARYVEKVRFLEAQNRVLENDIGLFRQAAHIHTGKVRDYYDAEKTSLATL 113
Query: 427 VR 432
VR
Sbjct: 114 VR 115
>U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate
filament, d protein1, isoform a protein.
Length = 575
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 247 ER*LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNT 426
+R + +LN+RLA Y++KVR LE++N L +I ++ ++ Y+ E
Sbjct: 54 KREIADLNNRLARYVEKVRFLEAQNRVLENDIGLFRQAAHIHTGKVRDYYDAEKTSLATL 113
Query: 427 VR 432
VR
Sbjct: 114 VR 115
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARN 423
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A++
Sbjct: 58 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKH 109
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARN 423
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A++
Sbjct: 684 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKH 735
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARN 423
LNDRLA YI+KVR LE++N L +I + + ++ G+++ E+ A++
Sbjct: 684 LNDRLADYIEKVRFLEAQNRCLSHDIDILRNGFSGG-GHVSGLFDAEINQAKH 735
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 34.7 bits (76), Expect = 0.043
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 256 LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNTVR 432
+ +LN+RLA Y++KVR LE++N L +I + I +E E VR
Sbjct: 59 IADLNNRLARYVEKVRFLEAQNRVLENDIGVFRNAAHTHSERIAVYFESEKASLFTLVR 117
>X70832-1|CAA50180.1| 500|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQD 414
LNDRLA YI+KVR L+++N L +I+ + + +I +E E+ +
Sbjct: 40 LNDRLADYIEKVRFLKAQNHVLSHDIEILRRGFSGG-GHISSFFESEISN 88
>AF047657-10|AAK18940.2| 500|Caenorhabditis elegans Intermediate
filament, c protein 1 protein.
Length = 500
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQD 414
LNDRLA YI+KVR L+++N L +I+ + + +I +E E+ +
Sbjct: 40 LNDRLADYIEKVRFLKAQNHVLSHDIEILRRGFSGG-GHISSFFESEISN 88
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 292 DKVRQLESENSGLRREIQTTQEVV 363
D + QLESENS LRRE+ E++
Sbjct: 467 DSILQLESENSRLRREVTEKGELI 490
>U80453-1|AAK31444.1| 403|Caenorhabditis elegans Hypothetical
protein C23H3.5 protein.
Length = 403
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = -3
Query: 443 EMYHLTVFLASWSSCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNWRTLSI 288
++Y L + + C+Y+ + R+ SCV C + +W LS+
Sbjct: 124 DVYKLEIKAVRYMGCAYVKRVYLLERIRESCVKCADGAIGLLEIDHWINLSL 175
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 238 FARER*LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTR 369
FA+ER +Q R+ Y +++ Q++ E +RE +E R
Sbjct: 343 FAKERLIQEARSRIEQYENRLLQMQGEFDHAKREADENREEAQR 386
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 238 FARER*LQNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTR 369
FA+ER +Q R+ Y +++ Q++ E +RE +E R
Sbjct: 343 FAKERLIQEARSRIEQYENRLLQMQGEFDHAKREADENREEAQR 386
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 617 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 673
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 386 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 442
>Z81096-5|CAD54150.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 202 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 258
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 384 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 440
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 442 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 498
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 617 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 673
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 386 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 442
>Z78065-8|CAD54156.1| 507|Caenorhabditis elegans Hypothetical
protein T09E8.1e protein.
Length = 507
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 202 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 258
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 384 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 440
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 442 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 498
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 259 QNLNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKG---MYEHELQDAR 420
+ D L +DK++QLE+E R +Q +E ++ E ELQ++R
Sbjct: 242 ERARDDLTRCVDKIQQLENELDETRAAVQNGDHANEQEYHELRDKIWKQERELQESR 298
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Frame = +1
Query: 190 FCRSSKQST*SY----QAKPFARER*LQNLND-RLAAYIDKVRQLES-ENSGLRREIQTT 351
+C+ SK++ SY Q K R+R + + R + ++ +LES E +G+RR +++T
Sbjct: 991 YCKKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGVRRTLRST 1050
Query: 352 QE 357
Q+
Sbjct: 1051 QD 1052
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Frame = +1
Query: 190 FCRSSKQST*SY----QAKPFARER*LQNLND-RLAAYIDKVRQLES-ENSGLRREIQTT 351
+C+ SK++ SY Q K R+R + + R + ++ +LES E +G+RR +++T
Sbjct: 991 YCKKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGVRRTLRST 1050
Query: 352 QE 357
Q+
Sbjct: 1051 QD 1052
>AF026210-3|AAB71286.3| 382|Caenorhabditis elegans Hypothetical
protein F48A11.4 protein.
Length = 382
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 404 SCSYIPLMLETSRVTTSCVVCISRRNPEFSLSNW 303
SC ++P + S +S +C SR P F+ NW
Sbjct: 330 SCFHLPPLDFQSFFVSSLKICKSRTLPHFTTQNW 363
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 265 LNDRLAAYIDKVRQLESENSGLRREIQTTQEVVTREVSNIKGMYEHELQDARNT 426
LN++ + + K+ ++ SEN L R++Q +E + V + + + H QD NT
Sbjct: 178 LNEKNSQFQTKLAEISSENRNLERKVQKFREELI--VKDQRSLEVH--QDQENT 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,285,912
Number of Sequences: 27780
Number of extensions: 226502
Number of successful extensions: 771
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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