Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021151
         (801 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80667-1|AAB38966.1|  382|Drosophila melanogaster opsin protein.       29   9.8  
U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5 pr...    29   9.8  
AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p pro...    29   9.8  
AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA...    29   9.8  

>U80667-1|AAB38966.1|  382|Drosophila melanogaster opsin protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 784 SHSRYRLIRLALRHAWLNLGDKHITTG 704
           SH +YRL  L  R  WL + +KH T+G
Sbjct: 335 SHPKYRL-ELERRLPWLGIREKHATSG 360


>U67905-1|AAC47426.1|  382|Drosophila melanogaster rhodopsin 5
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 784 SHSRYRLIRLALRHAWLNLGDKHITTG 704
           SH +YRL  L  R  WL + +KH T+G
Sbjct: 335 SHPKYRL-ELERRLPWLGIREKHATSG 360


>AY069237-1|AAL39382.1|  382|Drosophila melanogaster GH28578p
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 784 SHSRYRLIRLALRHAWLNLGDKHITTG 704
           SH +YRL  L  R  WL + +KH T+G
Sbjct: 335 SHPKYRL-ELERRLPWLGIREKHATSG 360


>AE014134-2131|AAF53145.1|  382|Drosophila melanogaster CG5279-PA
           protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 784 SHSRYRLIRLALRHAWLNLGDKHITTG 704
           SH +YRL  L  R  WL + +KH T+G
Sbjct: 335 SHPKYRL-ELERRLPWLGIREKHATSG 360


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,688,809
Number of Sequences: 53049
Number of extensions: 550688
Number of successful extensions: 1062
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)