Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021150X
(324 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0508 - 29897536-29897982 39 0.001
09_04_0363 + 16957949-16958361,16958524-16958527 38 0.001
08_02_0786 + 21198247-21198921 38 0.002
02_01_0715 - 5346036-5346557 38 0.002
06_03_0745 + 24109406-24109921 36 0.006
02_04_0078 + 19507705-19508169 36 0.010
03_06_0269 - 32761354-32761857,32762094-32762190,32762387-327624... 35 0.013
07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818 35 0.017
07_01_0496 - 3730822-3731280 34 0.022
01_06_0827 + 32260313-32260525,32261862-32262716 32 0.090
07_01_0492 - 3708379-3708864 32 0.12
03_06_0270 - 32768979-32769488 31 0.16
09_04_0568 + 18591757-18592251 28 1.9
03_02_0661 + 10247128-10247895 28 1.9
10_01_0040 - 467947-468480 27 2.6
07_03_1007 + 23268771-23269021,23269098-23269128 26 5.9
01_06_1365 - 36690267-36692222 26 5.9
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 26 7.8
08_02_1177 + 24946763-24947275 26 7.8
05_05_0057 + 21995018-21997006 26 7.8
04_03_0980 + 21406822-21409496,21410322-21410376 26 7.8
>01_06_0508 - 29897536-29897982
Length = 148
Score = 38.7 bits (86), Expect = 0.001
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 174 LKCKNGCDYFGNPQWQGYCSKCHRE 248
L C NGC +FG+ +G CSKC+R+
Sbjct: 14 LPCANGCGFFGSADTRGLCSKCYRQ 38
>09_04_0363 + 16957949-16958361,16958524-16958527
Length = 138
Score = 38.3 bits (85), Expect = 0.001
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQMR 257
C NGC +FG+ + CSKC+R+Q++
Sbjct: 2 CTNGCGFFGSEATKNLCSKCYRDQLK 27
Score = 31.1 bits (67), Expect = 0.21
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 162 DQNDLKCKNGCDYFGNPQWQGYCSKCHREQMR 257
D+ C + C +F + + + CSKC+R+ ++
Sbjct: 57 DEQLALCASSCGFFSSKETKNMCSKCYRDHLK 88
>08_02_0786 + 21198247-21198921
Length = 224
Score = 37.5 bits (83), Expect = 0.002
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQMR 257
C NGC +FG+ + CSKC+R+Q++
Sbjct: 21 CANGCGFFGSEATKKLCSKCYRDQLK 46
Score = 35.9 bits (79), Expect = 0.007
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 162 DQNDLKCKNGCDYFGNPQWQGYCSKCHREQMR 257
D+ C +GC +FG+ + CSKC+R+ ++
Sbjct: 75 DEQLALCSSGCGFFGSKETNNMCSKCYRDHLK 106
>02_01_0715 - 5346036-5346557
Length = 173
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 165 QNDLKCKNGCDYFGNPQWQGYCSKCHREQMRGKEKQRK 278
+ + C N C +FG+ CSKCH+E + KE+Q K
Sbjct: 12 EGPILCINNCGFFGSAATMNMCSKCHKEMIM-KEEQAK 48
>06_03_0745 + 24109406-24109921
Length = 171
Score = 36.3 bits (80), Expect = 0.006
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 165 QNDLKCKNGCDYFGNPQWQGYCSKCHREQMRGKEKQR 275
+ + C N C +FG+ CSKCH+E + +E+ +
Sbjct: 12 EGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAK 48
>02_04_0078 + 19507705-19508169
Length = 154
Score = 35.5 bits (78), Expect = 0.010
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQMRGKE 266
C N C +FG+P CSKC+R++ +G+E
Sbjct: 15 CANNCGFFGSPATLDLCSKCYRDR-QGRE 42
>03_06_0269 -
32761354-32761857,32762094-32762190,32762387-32762421,
32763035-32763040
Length = 213
Score = 35.1 bits (77), Expect = 0.013
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQMRGK 263
C N C +FG+ + CSKC+R+ ++ K
Sbjct: 77 CVNNCGFFGSRMTENMCSKCYRDTVKAK 104
>07_01_0493 - 3715677-3715907,3716675-3716861,3717631-3717818
Length = 201
Score = 34.7 bits (76), Expect = 0.017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQ 251
C GC +FG+ G CSKC++EQ
Sbjct: 17 CAAGCGFFGSAATGGLCSKCYKEQ 40
>07_01_0496 - 3730822-3731280
Length = 152
Score = 34.3 bits (75), Expect = 0.022
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHREQ 251
C GC +FG+ G CSKC+++Q
Sbjct: 18 CAAGCGFFGSAATDGLCSKCYKQQ 41
>01_06_0827 + 32260313-32260525,32261862-32262716
Length = 355
Score = 32.3 bits (70), Expect = 0.090
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHRE 248
C +GC ++GNP CS C+R+
Sbjct: 205 CASGCGFYGNPATLDMCSVCYRQ 227
>07_01_0492 - 3708379-3708864
Length = 161
Score = 31.9 bits (69), Expect = 0.12
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHRE 248
C N C +FG+ CSKC+R+
Sbjct: 23 CVNNCGFFGSSMTNNMCSKCYRD 45
>03_06_0270 - 32768979-32769488
Length = 169
Score = 31.5 bits (68), Expect = 0.16
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKCHRE 248
C GC +FG+ CS+C+RE
Sbjct: 24 CVTGCGFFGSEATNNMCSRCYRE 46
>09_04_0568 + 18591757-18592251
Length = 164
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKC 239
C N C + GNP Q C C
Sbjct: 22 CANSCGFPGNPATQNLCQNC 41
>03_02_0661 + 10247128-10247895
Length = 255
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 245 GTDERQRKAEKASSFTSTLPRS 310
G +E++ + EKA SF + LPRS
Sbjct: 133 GEEEQEEEEEKAESFAAPLPRS 154
>10_01_0040 - 467947-468480
Length = 177
Score = 27.5 bits (58), Expect = 2.6
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 300 RVDVNDEAFSAFLCLSSVPCDISSSTPAIVGC 205
RV ND + F + + C++ + P +V C
Sbjct: 112 RVPANDNSARGFDVVDDIKCELDKACPGVVSC 143
>07_03_1007 + 23268771-23269021,23269098-23269128
Length = 93
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 279 AFSAFLCLSSVPCDISSSTPAIVGCQN 199
+F A L L VPC S ST +V C N
Sbjct: 5 SFPAALLLVVVPCMQSMSTCRVVACMN 31
>01_06_1365 - 36690267-36692222
Length = 651
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 192 CDYFGNPQWQGYCSKCHREQMRGKE 266
CD + + G+C+ C RE++ G E
Sbjct: 21 CDLHPDETFTGFCTACLRERLAGLE 45
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 206 QPTMAGVLLEMSQGTDERQRKAEKASSFTSTLPRSDQRK 322
+P + L + +G D+ R A FTS P+S +K
Sbjct: 714 RPNLMQKLKKWGRGKDDESRLASPTQFFTSDSPKSASQK 752
>08_02_1177 + 24946763-24947275
Length = 170
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +3
Query: 180 CKNGCDYFGNPQWQGYCSKC 239
C N C + GNP C C
Sbjct: 22 CANSCGFPGNPATNNLCQNC 41
>05_05_0057 + 21995018-21997006
Length = 662
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 192 CDYFGNPQWQGYCSKCHREQMRGKE 266
CD + G+C+ C RE++ G E
Sbjct: 20 CDLHPGETFTGFCAACLRERLAGLE 44
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 243 CDISSSTPAIVGCQN 199
CD S ++P +GCQN
Sbjct: 307 CDFSFASPPFIGCQN 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,821,056
Number of Sequences: 37544
Number of extensions: 173155
Number of successful extensions: 400
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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