Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021150X
(324 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 0.30
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 2.8
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 2.8
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 21 3.7
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 3.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 4.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 4.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 4.9
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 4.9
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 6.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 8.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 20 8.6
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.6 bits (51), Expect = 0.30
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 315 WSDLGRVDVNDEAFSA--FLCLSSVPCDISSSTPAIVGCQNNHIHSCTS 175
WS L + ND+ +S+ +L + S P ++ + I Q I S TS
Sbjct: 362 WSSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVKIDEDQKCSIESITS 410
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 2.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 114 RSYKYMITSKMPSLRIDQNDLKCKNGCDYFGN 209
R Y+ + T + + R ++ L KNG D GN
Sbjct: 316 RIYEAIHTGSVINTRGERIQLTEKNGIDVLGN 347
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 2.8
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3
Query: 216 WQGYCSKC 239
W G+CS+C
Sbjct: 357 WSGFCSQC 364
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 21.0 bits (42), Expect = 3.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 201 NNHIHSCTSSHFG 163
NNH + CTS G
Sbjct: 62 NNHCNRCTSRQIG 74
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.0 bits (42), Expect = 3.7
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 224 PLPLWVAKIITSIL 183
P PLW K I+S++
Sbjct: 43 PKPLWTGKQISSLI 56
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPIPVP 124
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 4.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 45 NYEGFSCYNRN*SFFAYKLIETIRSYKYMITSKMP 149
NY ++ YN N ++ YK + +Y I +P
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYYNINYIEQIPVPVP 124
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.6 bits (41), Expect = 4.9
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3
Query: 162 DQNDLKCKNGCDYFGNPQWQ 221
++ L+ G +Y GN +W+
Sbjct: 156 ERRALQISEGVEYVGNIRWE 175
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 117 SYKYMITSKMPSLRIDQNDLKCKNGCD 197
+Y+ ITS +LR D++ + CD
Sbjct: 13 NYQSSITSAFENLRDDEDFVDVTLACD 39
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 237 CHREQMRGKEKQRKPHRLHRL 299
C R++ R +K R+ +LH +
Sbjct: 253 CSRDRSREYKKDRRYDQLHNV 273
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.8 bits (39), Expect = 8.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 196 IILATHNGRGTARNVTGN 249
+ L H GRG+ N + N
Sbjct: 303 LTLRIHRGRGSVHNGSNN 320
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,197
Number of Sequences: 438
Number of extensions: 2200
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7093251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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