Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021149
         (813 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)                    34   0.12 
SB_52732| Best HMM Match : M (HMM E-Value=0.019)                       30   1.9  
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)                     30   2.6  
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)                29   4.5  
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.5  
SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16)                    29   4.5  

>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
          Length = 1038

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +2

Query: 23   RDKDEIQ-RIKREIHSQSVERGVSECCRLEQAYTKRREQLARDHEKLLQMLLKHRDQELV 199
            +  DE+  + KRE + + +E+ V E  +++    K + QL  D EK+ ++L++ +++   
Sbjct: 945  KQMDELHTKRKREQNKKHIEQAVKERQKMKDFQDKEKVQLQEDQEKIAEILIEDKERAQK 1004

Query: 200  KLDRL 214
            +L  L
Sbjct: 1005 ELQAL 1009



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 2    ALAKKTNRDKDEIQRIKREIHSQSVERGVSECCRLEQAYTKRREQLARDHEKLLQMLLKH 181
            AL K+ ++D  + ++I    + ++ ++G+ E   L Q + K  + L RDH + +  LL+ 
Sbjct: 855  ALRKRVDKDLKKSEKIGS--YEEAYKKGMDEINVLNQEHNKMVDDLKRDHREQIITLLRR 912

Query: 182  RDQELVKL 205
            +  E   L
Sbjct: 913  QLAEQFSL 920


>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
          Length = 1366

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +2

Query: 2   ALAKKTNRDKDEIQRIKREIHSQSVERGVSECCRLEQAYTKRREQLAR---DHEKLLQML 172
           +L ++  + K + + +++EI  Q     V+   +LEQ  T  ++QL +   DH+  ++ML
Sbjct: 413 SLVEECEKHKRQTKLLQKEIDDQ--REAVAAKDQLEQEITSLKQQLEQQEADHQSTIRML 470

Query: 173 LKHRDQELVKLDRLCGGAPEG*RS 244
              +DQ L K  RL     E  RS
Sbjct: 471 ---QDQILAKEQRLVAEIAEVERS 491


>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
          Length = 732

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 23  RDKDE-IQRIKREIHSQSVERGVSECCRLEQAYTKRREQLARDHEK 157
           ++K+E +  ++ E+  +  E+        EQ+  K RE LAR+HEK
Sbjct: 314 KEKEEALDAVREELEEEQEEKESRLRDEKEQSLRKLRESLAREHEK 359


>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
          Length = 298

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +2

Query: 11  KKTNRDKDEIQRIKR-EIHSQSVERGVSECCRLEQAYTKRREQLARDHEK 157
           +K  R+K+E +R+KR E   +  E+   E  R E+   +R+EQ  R+ E+
Sbjct: 94  EKRRREKEEEERLKRAEEEKRREEKRREEKRREEELKRERKEQERREKER 143


>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 777

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 489 HGPSRSKTFLSLARLRSNHYRLVKCSSTRLETNRPDHIELGVRIDI 352
           HG   +KT  SL  LR +  RLV+C+    E     HIE     D+
Sbjct: 76  HGNEPTKTLCSLVNLRKDSLRLVRCTDPSDEITY--HIEFLFDADV 119


>SB_25419| Best HMM Match : PH (HMM E-Value=2.8e-16)
          Length = 453

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/61 (26%), Positives = 36/61 (59%)
 Frame = +2

Query: 29  KDEIQRIKREIHSQSVERGVSECCRLEQAYTKRREQLARDHEKLLQMLLKHRDQELVKLD 208
           +++I+R +R+I  +  E        LEQ   +  EQL ++ + + +++ K R++E +KL+
Sbjct: 5   QEKIER-ERQIEFEFFETEQLLLEELEQKQREAAEQLEQERKAMQEIIEKEREEERLKLE 63

Query: 209 R 211
           +
Sbjct: 64  K 64


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,708,405
Number of Sequences: 59808
Number of extensions: 346560
Number of successful extensions: 962
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)