Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021148
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.83 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 279 TRNRNYSATCIFGPQ 323
           TR RN +A C+FG Q
Sbjct: 27  TRTRNKAAECVFGKQ 41


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 251 NLEFWRQIRNKKSQLLR 301
           N+EFWR IR    +L R
Sbjct: 332 NVEFWRNIREDYDRLAR 348


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 194 DTVLFKIKTTAPKKYCVRPNLEFWRQIRNK 283
           D + ++ K   PK  C   N  F+R+   K
Sbjct: 626 DLLEYEAKEEGPKVVCYMTNWAFYRKAEGK 655


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 605 LGPHSYGPEKSTQVTIMPWVVT 670
           L  H Y   K+ QV  +PW+V+
Sbjct: 297 LPTHPYQMIKNQQVYDVPWIVS 318


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 605 LGPHSYGPEKSTQVTIMPWVVT 670
           L  H Y   K+ QV  +PW+V+
Sbjct: 297 LPTHPYQMIKNQQVYDVPWIVS 318


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 191 NDTVLFKIKTTAPKKYCVR 247
           ND +LF +K   P+  C R
Sbjct: 225 NDVLLFFVKVFRPEPLCER 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,386
Number of Sequences: 336
Number of extensions: 3676
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)