Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021148
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   5.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   7.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   9.6  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -3

Query: 150 SKSPEKLTLNFNSFCGSIVSTWLGILLYYKHSISLAKFNRLRK 22
           +K  E +  NFN     I   W G LL  K    LAK  + +K
Sbjct: 222 AKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKK 264


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 278 FEFGARTPNWDARNISLVLLF*S*IALYRLSGSL 177
           F+  A T  W   NI   LLF +  ++YR   SL
Sbjct: 106 FDLIALTETWLVDNIPSALLFNNNFSVYRCDRSL 139


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 24  FSIC*ILPTRYCAYSTIKCLTKC 92
           +S C   P + C    +KC T C
Sbjct: 32  YSCCAPCPQKACISEAVKCQTSC 54


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 154 WLHNLHETNEPDKRYSAIQDQNNS 225
           W H+  E N+P  RY+ +   ++S
Sbjct: 691 WDHSNMEVNKPKNRYANVTSYDHS 714


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 286 IAITPQPVYLDPNENHKH 339
           +AI P PV  DP+E+  H
Sbjct: 30  LAIDPTPVSADPDEDIPH 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,062
Number of Sequences: 2352
Number of extensions: 15103
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)