Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021148
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 56 3e-08
AF039720-13|AAB96705.1| 245|Caenorhabditis elegans Hypothetical... 54 1e-07
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 37 0.013
Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical pr... 33 0.16
U97007-8|AAB52293.1| 323|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81524-5|CAB04253.2| 283|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z49909-10|CAA90112.1| 228|Caenorhabditis elegans Hypothetical p... 31 0.63
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z96048-2|CAB09420.1| 155|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 30 1.9
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 2.6
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 29 4.5
Z83228-7|CAE17819.1| 123|Caenorhabditis elegans Hypothetical pr... 28 5.9
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 28 5.9
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +2
Query: 134 FSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPN 253
FSG F+H TTYM LTN + V F +KTT P YCVRPN
Sbjct: 16 FSGPFDHVITTYMTLTNISQSPVCFLVKTTVPNSYCVRPN 55
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 GVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQSVIAPE-GKTNIDQVWKEISPEQLMDY 432
G+L ++I + QP+ P + +HKF+VQS +AP ++++ VWK + P++L
Sbjct: 57 GILNIGDSKQIEVMLQPLEKVPPDAKQHKFLVQSCVAPSIDVSDLESVWKNVKPDELTYN 116
Query: 433 KLKCVF 450
+L F
Sbjct: 117 RLVVTF 122
>AF039720-13|AAB96705.1| 245|Caenorhabditis elegans Hypothetical
protein F33D11.11 protein.
Length = 245
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +2
Query: 83 NQVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPN 253
+ +L + P EL F +G F T++M L N + + V FK+KTTAPK+YCVRPN
Sbjct: 5 HSLLQVTPNRELVF----TGPFSDVVTSHMTLKNTSTNPVCFKVKTTAPKQYCVRPN 57
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Frame = +1
Query: 256 GVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQSVIAP-EGKTNIDQVWKEISPEQLMDY 432
G+L ++I + QP+ P++ +HKFMVQS +AP E +++ VWK I P +L
Sbjct: 59 GLLKSGDSKQITVMLQPLEGIPSDAGRHKFMVQSCVAPSEDLPDLESVWKIIDPAELTYS 118
Query: 433 KLKCVFETPRGTNLNDSGDNAAQNDAPRKELQSQKTLSLPLRRSYCACVSRQAGTGASRS 612
KL F R SGD+ ++ + + L SY S + R
Sbjct: 119 KLMVTFVDKRDP---ASGDDTKTFAVRNEDSFASSGQAQELGSSYSGTPSHDGTVNSLRK 175
Query: 613 SL 618
SL
Sbjct: 176 SL 177
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 NQVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDT-VLFKIKTTAPKKYCVRPN 253
N ++I P++EL+ + G E+ + + N ++DT ++FK KTT+P+K+ VRP+
Sbjct: 353 NDFVSITPRDELRLE-KLDG--ENDLLDVVLVKNQSSDTPIMFKFKTTSPEKFRVRPS 407
>Z68300-1|CAA92617.1| 185|Caenorhabditis elegans Hypothetical
protein T22B3.3 protein.
Length = 185
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 PNQVLTIEPQNEL--KFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPN 253
P+ L +EP +++ KFK+N + + +TNP D + +K+K T + + VRP
Sbjct: 10 PDFKLKVEPADKIVIKFKMNEESIVP------LTITNPLKDRICYKVKCTDNEIFRVRPP 63
Query: 254 LEF 262
L F
Sbjct: 64 LGF 66
>U97007-8|AAB52293.1| 323|Caenorhabditis elegans Hypothetical
protein ZC196.2 protein.
Length = 323
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 161 TTYMRLTNPTNDTVLFKIKTTAPKKYCVRPN 253
T Y+ L N + V FK+KT+ P Y RPN
Sbjct: 27 TAYVTLKNISEKPVCFKVKTSVPNMYVSRPN 57
>Z81524-5|CAB04253.2| 283|Caenorhabditis elegans Hypothetical
protein F32H5.5 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 116 LKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNLEFWRQIRNKKSQL 295
++F + + +F C TY T VL I + P + +R L FW S L
Sbjct: 40 VQFDILMNTVFYVNCITYKLKTIEEYHRVLLLIFESYPSLFILREGLSFWAYRFQCSSLL 99
Query: 296 LRNLYIWTPMK-TTSINLWSK 355
L+ ++ +T K + +W K
Sbjct: 100 LKCIFRFTYAKYPFAAEIWKK 120
>Z49909-10|CAA90112.1| 228|Caenorhabditis elegans Hypothetical
protein C14A4.8 protein.
Length = 228
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 113 ELKFKVNFSGLFE---HGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNL 256
E KF V F GL E C ++ L NPT +T++F I+T + V+P++
Sbjct: 33 ESKF-VQFLGLQELTDRACD-HVELANPTKNTIIFNIRTPTSPCFFVKPHV 81
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 161 TTYMRLTNPTNDTVLFKIKTTA 226
TT +++TNPT D FK+K T+
Sbjct: 39 TTVLKMTNPTTDKCAFKVKCTS 60
>Z96048-2|CAB09420.1| 155|Caenorhabditis elegans Hypothetical
protein F57A10.2 protein.
Length = 155
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 170 MRLTNPTNDTVLFKIKTTAPKKYCVRPNLEF 262
+RL NPT+ + FK++ T+ + + V+P + F
Sbjct: 59 LRLHNPTDKRITFKVRCTSAELFRVQPPIAF 89
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 80 PNQVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRP 250
P +TI+P +L FK + + ++LTN + ++FKIKT+ + Y + P
Sbjct: 189 PKPHITIDPPGDLMFKADQQEQKK------LKLTNTHDKKIMFKIKTSDNQVYLMNP 239
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 80 PNQVLTIEPQNELKFKVNFSGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRP 250
P ++IEP +L FK + + + LTN + ++FKIKT+ + Y V P
Sbjct: 223 PKPHISIEPPGDLMFKADQQEQKK------LTLTNTHDKKIMFKIKTSDNQVYLVNP 273
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.5
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = +1
Query: 181 EPDKRYSAIQDQNNSTKEILRASQFGVLAPN-SKQEIA-ITPQ-----PVYLDPNENHKH 339
E DK+Y Q T A++F L P SK+++A + P+ +++ NE H
Sbjct: 34 EHDKKYDHEQFLGKDT-----AAEFDELTPEKSKEKLAKLVPKMDADSDGFIEENELKDH 88
Query: 340 -KFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETPRGTNLNDSGDNAAQNDAP 513
FM + + ++D+ WK E+++D K+K +E R + S D A Q +P
Sbjct: 89 INFMQKRYV----NNDVDRTWKNYKAEKIVDGKIK--WEDYR-EMVYGSADGAGQELSP 140
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 28.7 bits (61), Expect = 4.5
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = +1
Query: 181 EPDKRYSAIQDQNNSTKEILRASQFGVLAPN-SKQEIA-ITPQ-----PVYLDPNENHKH 339
E DK+Y Q T A++F L P SK+++A + P+ +++ NE H
Sbjct: 34 EHDKKYDHEQFLGKDT-----AAEFDELTPEKSKEKLAKLVPKMDADSDGFIEENELKDH 88
Query: 340 -KFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFETPRGTNLNDSGDNAAQNDAP 513
FM + + ++D+ WK E+++D K+K +E R + S D A Q +P
Sbjct: 89 INFMQKRYV----NNDVDRTWKNYKAEKIVDGKIK--WEDYR-EMVYGSADGAGQELSP 140
>Z83228-7|CAE17819.1| 123|Caenorhabditis elegans Hypothetical
protein F52F12.8 protein.
Length = 123
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 256 GVLAPNSKQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYK 435
G+L N IA+ + + + KH F V + APEG T + W E ++K
Sbjct: 59 GILDYNQSLTIALIYRGGQDNVPSDEKHHFGVYHIPAPEGCT-CEGAWAEHYGPPQGEHK 117
Query: 436 LKCVFE 453
L+ V+E
Sbjct: 118 LRVVWE 123
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 495 CIIARIVKISATRSFKDTL*LVVHQLLGAYLLPHLINVGFSFWSYY 358
C+++R+ +++TR+ L HQ++ + PHL + +W Y
Sbjct: 203 CVLSRLPLVNSTRALLTAL----HQIIASPSSPHLPLESYIYWCLY 244
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 170 MRLTNPTNDTVLFKIKTTAPKKYCVR 247
+ LTNPT D FKIK T+ + + ++
Sbjct: 42 LNLTNPTKDRYAFKIKCTSNQLFKIK 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,395,911
Number of Sequences: 27780
Number of extensions: 344047
Number of successful extensions: 1082
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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