Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021147
(827 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p pro... 45 1e-04
AY113369-1|AAM29374.1| 910|Drosophila melanogaster LD32717p pro... 45 1e-04
AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB... 45 1e-04
AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA... 45 1e-04
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 30 3.4
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 30 3.4
AY060879-1|AAL28427.1| 603|Drosophila melanogaster GM04147p pro... 30 4.4
AE013599-1033|AAF58839.1| 603|Drosophila melanogaster CG11866-P... 30 4.4
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro... 29 5.9
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro... 29 5.9
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 29 5.9
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P... 29 5.9
AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-P... 29 7.8
>BT004479-1|AAO42643.1| 1354|Drosophila melanogaster LD41624p protein.
Length = 1354
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 256 KHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSH 387
K RYL EA++ ++ + P+TREH P V+ EL + F+ SP +
Sbjct: 1290 KQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKN 1333
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 VQNMISSGDVNGAFQXXXXXXXXXXVVTACRSAEPSLVFGPP-CQLKQHVLLSLVQQLAA 232
++ ++ +G +N AF V R + + F P C+L+Q VLLSL+QQ++A
Sbjct: 1222 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA 1281
Query: 233 DMSKDTQ 253
DM+ +
Sbjct: 1282 DMTNHNE 1288
>AY113369-1|AAM29374.1| 910|Drosophila melanogaster LD32717p
protein.
Length = 910
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 256 KHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSH 387
K RYL EA++ ++ + P+TREH P V+ EL + F+ SP +
Sbjct: 846 KQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKN 889
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 VQNMISSGDVNGAFQXXXXXXXXXXVVTACRSAEPSLVFGPP-CQLKQHVLLSLVQQLAA 232
++ ++ +G +N AF V R + + F P C+L+Q VLLSL+QQ++A
Sbjct: 778 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA 837
Query: 233 DMSKDTQ 253
DM+ +
Sbjct: 838 DMTNHNE 844
>AE014134-2028|AAF53066.2| 1354|Drosophila melanogaster CG6181-PB,
isoform B protein.
Length = 1354
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 256 KHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSH 387
K RYL EA++ ++ + P+TREH P V+ EL + F+ SP +
Sbjct: 1290 KQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKN 1333
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 VQNMISSGDVNGAFQXXXXXXXXXXVVTACRSAEPSLVFGPP-CQLKQHVLLSLVQQLAA 232
++ ++ +G +N AF V R + + F P C+L+Q VLLSL+QQ++A
Sbjct: 1222 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA 1281
Query: 233 DMSKDTQ 253
DM+ +
Sbjct: 1282 DMTNHNE 1288
>AE014134-2027|AAF53067.2| 1354|Drosophila melanogaster CG6181-PA,
isoform A protein.
Length = 1354
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 256 KHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSH 387
K RYL EA++ ++ + P+TREH P V+ EL + F+ SP +
Sbjct: 1290 KQRYLNEALLAINMADPITREHAPKVLTELYRNCQQFIKNSPKN 1333
Score = 43.2 bits (97), Expect = 4e-04
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 VQNMISSGDVNGAFQXXXXXXXXXXVVTACRSAEPSLVFGPP-CQLKQHVLLSLVQQLAA 232
++ ++ +G +N AF V R + + F P C+L+Q VLLSL+QQ++A
Sbjct: 1222 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA 1281
Query: 233 DMSKDTQ 253
DM+ +
Sbjct: 1282 DMTNHNE 1288
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 419 SSNMRSLRASGCEGEAVTKADTCCCSSATTPGRCSRVTGLDVSRF 285
+S MR R C GE ++ +CC TTP C +G +S +
Sbjct: 659 NSCMRPPRCMKCAGEHLS---SCCTKPRTTPATCVNCSGQHISAY 700
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 419 SSNMRSLRASGCEGEAVTKADTCCCSSATTPGRCSRVTGLDVSRF 285
+S MR R C GE ++ +CC TTP C +G +S +
Sbjct: 637 NSCMRPPRCMKCAGEHLS---SCCTKPRTTPATCVNCSGQHISAY 678
>AY060879-1|AAL28427.1| 603|Drosophila melanogaster GM04147p
protein.
Length = 603
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +1
Query: 163 TGVRAPLSAQAARTAIISSATGRRYVQGHAAKHRYLEEAVMNLDTSSPVTREHLPGVVAE 342
TGV+ P + A R++++ T + Q H++ +R + + +++S VTR H + +
Sbjct: 47 TGVQEPPESTANRSSVLRRTTSYQGNQAHSS-YRVVSAGSL-AESASAVTRLHSYTMQMQ 104
Query: 343 LQQQVSAFVTASPSHP 390
Q+ +A T + S P
Sbjct: 105 RQRPPTATTTTTTSAP 120
>AE013599-1033|AAF58839.1| 603|Drosophila melanogaster CG11866-PA
protein.
Length = 603
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +1
Query: 163 TGVRAPLSAQAARTAIISSATGRRYVQGHAAKHRYLEEAVMNLDTSSPVTREHLPGVVAE 342
TGV+ P + A R++++ T + Q H++ +R + + +++S VTR H + +
Sbjct: 47 TGVQEPPESTANRSSVLRRTTSYQGNQAHSS-YRVVSAGSL-AESASAVTRLHSYTMQMQ 104
Query: 343 LQQQVSAFVTASPSHP 390
Q+ +A T + S P
Sbjct: 105 RQRPPTATTTTTTSAP 120
>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
protein.
Length = 1455
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 274 EAVMNLDTSSPVTREHLPGVVAEL 345
E ++NL T S V REH PG+ +L
Sbjct: 342 ETLVNLRTDSDVVREHFPGLPCDL 365
>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
protein.
Length = 1454
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 274 EAVMNLDTSSPVTREHLPGVVAEL 345
E ++NL T S V REH PG+ +L
Sbjct: 341 ETLVNLRTDSDVVREHFPGLPCDL 364
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 29.5 bits (63), Expect = 5.9
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Frame = +1
Query: 85 ERRLPAGLVRLGPVPRGHSLQVGRAFTGVRAPLSAQAARTAIIS-------SATGRRYVQ 243
ER P ++ P ++ R ++G + A+ ++I +A ++
Sbjct: 3750 ERTTPLTPLKPAPFIPSNNRSYERKYSGPSTEAAETASENSLIEDLNIDALNARNKKIFD 3809
Query: 244 GHAAKHRYLEEAVMNLDTSSPV-----TREHLPGVVAELQQQVSAFVTASPSHP 390
H+ KH L+ V+ +++ + + T + E QQQ FVT +PS P
Sbjct: 3810 KHSKKHPALKPKVVKVESETGLEVEAGTEVAVEDETTEEQQQEQGFVTTTPSTP 3863
>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
protein.
Length = 1266
Score = 29.5 bits (63), Expect = 5.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 274 EAVMNLDTSSPVTREHLPGVVAEL 345
E ++NL T S V REH PG+ +L
Sbjct: 313 ETLVNLRTDSDVVREHFPGLPCDL 336
>AE014296-3303|AAF49048.3| 1465|Drosophila melanogaster CG17233-PC,
isoform C protein.
Length = 1465
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 262 RYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASP 381
+Y A+ + D SP+T H VV+ Q QV + TASP
Sbjct: 312 QYASPALSSAD-GSPITNLHAVDVVSTPQAQVIVYKTASP 350
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,103,382
Number of Sequences: 53049
Number of extensions: 779712
Number of successful extensions: 2290
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2290
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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