Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021146
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 15/55 (27%), Positives = 22/55 (40%)
 Frame = +1

Query: 82  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSA 246
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADA 708


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 508 GDAWPSWRLSALLAKELELD 449
           GD W SW     + +EL LD
Sbjct: 381 GDLWLSWEEGMKVFEELLLD 400


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 554 RKDKHPVKIEFKIYLTENTVIRW 622
           R +K+P ++  + Y+ +    RW
Sbjct: 375 RSNKYPTRVPHRPYVAQYNARRW 397


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 539 NKILERKDKHPVKIEFKIYL 598
           ++ L  K   PVKI  K+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 539 NKILERKDKHPVKIEFKIYL 598
           ++ L  K   PVKI  K+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,305
Number of Sequences: 336
Number of extensions: 2420
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)