Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021146
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF015904-1|ABM64215.1| 1281|Homo sapiens period 1 protein. 32 1.6
BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processi... 32 1.6
BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processi... 32 1.6
BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processi... 32 1.6
BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processi... 32 1.6
AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processi... 32 1.6
AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF102137-1|AAF15544.1| 1290|Homo sapiens PER1 protein. 32 1.6
AF022991-1|AAC51765.1| 1290|Homo sapiens Rigui protein. 32 1.6
AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein. 32 1.6
AB030817-1|BAA94085.1| 1290|Homo sapiens period1 protein. 32 1.6
AB002107-1|BAA22633.1| 1290|Homo sapiens hPer protein. 32 1.6
U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein. 32 2.1
BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding... 32 2.1
AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding... 32 2.1
AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding... 32 2.1
AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding... 32 2.1
AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein pro... 32 2.1
AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein pro... 32 2.1
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 31 2.7
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 31 2.7
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 31 2.7
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 31 2.7
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 31 2.7
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 31 2.7
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 31 2.7
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 31 2.7
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 31 2.7
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 31 2.7
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 31 3.6
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 31 3.6
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 31 3.6
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 3.6
BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain cont... 31 3.6
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 31 3.6
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 3.6
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 3.6
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 3.6
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 3.6
AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens ... 31 3.6
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.6
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 31 3.6
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 31 3.6
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 31 3.6
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 31 3.6
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 31 3.6
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.6
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 31 3.6
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 30 6.3
U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1 T... 30 8.3
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 30 8.3
AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1 pr... 30 8.3
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 30 8.3
>EF015904-1|ABM64215.1| 1281|Homo sapiens period 1 protein.
Length = 1281
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 809 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 851
>BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A, isoform 2
protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 187 SPHHFH 170
H H
Sbjct: 288 HRHRSH 293
>BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 187 SPHHFH 170
H H
Sbjct: 288 HRHRSH 293
>BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 41 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 100
Query: 187 SPHHFH 170
H H
Sbjct: 101 HRHRSH 106
>BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 41 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 100
Query: 187 SPHHFH 170
H H
Sbjct: 101 HRHRSH 106
>AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 187 SPHHFH 170
H H
Sbjct: 288 HRHRSH 293
>AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ34719 fis, clone MESAN2005689, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 187 SPHHFH 170
H H
Sbjct: 288 HRHRSH 293
>AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14936 fis, clone PLACE1010194, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 236
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRR 188
TLR +SR + + R P R ++ R R RS RHR++ P R
Sbjct: 152 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 211
Query: 187 SPHHFH 170
H H
Sbjct: 212 HRHRSH 217
>AF102137-1|AAF15544.1| 1290|Homo sapiens PER1 protein.
Length = 1290
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 818 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 860
>AF022991-1|AAC51765.1| 1290|Homo sapiens Rigui protein.
Length = 1290
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 818 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 860
>AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein.
Length = 1332
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 860 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 902
>AB030817-1|BAA94085.1| 1290|Homo sapiens period1 protein.
Length = 1290
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 818 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 860
>AB002107-1|BAA22633.1| 1290|Homo sapiens hPer protein.
Length = 1290
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 337 GHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPS 209
G + H GPAP H S+A R+ R+E P + + PS
Sbjct: 818 GERGCHHGPAPPSRRHHCRSKAKRSRHHQNPRAEAPCYVSHPS 860
>U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein.
Length = 815
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 368 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 427
>BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 980
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding RS
protein protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein
protein.
Length = 980
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 361 RAVQSREQGHQDH-HRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+ SR Q H + H +K S+ R+ R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 122 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 153
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 274 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 305
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 763 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 794
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 302 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 397
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 877 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 933
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 740 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 796
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 192 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 248
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain
containing 49 protein.
Length = 425
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = -3
Query: 364 LRAVQSREQGHQDHHRGPA-----PRHSEKHSASEA---DRAERFCRERSETPR----HR 221
L A Q R G ++H R + PRH+ K S EA DR R RS +PR H
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRPSKLHN 303
Query: 220 NKPS-RPVWSRRSP 182
+K + R RSP
Sbjct: 304 SKVNRRETGQTRSP 317
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1844 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1900
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ20291 fis, clone HEP04788. ).
Length = 425
Score = 31.1 bits (67), Expect = 3.6
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = -3
Query: 364 LRAVQSREQGHQDHHRGPA-----PRHSEKHSASEA---DRAERFCRERSETPR----HR 221
L A Q R G ++H R + PRH+ K S EA DR R RS +PR H
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRPSKLHN 303
Query: 220 NKPS-RPVWSRRSP 182
+K + R RSP
Sbjct: 304 SKVNRRETGQTRSP 317
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1940
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1940
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1940
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1940
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1565 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1621
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRER----SETPRHRNKPSRP 203
R + +E + R +PR + S S R+ RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 361 RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRS 185
R+V ++ HR + K S+S +R + R RS TP R++ P RRS
Sbjct: 1890 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNR--KTVRARSRTPSRRSRSHTPSRRRRS 1946
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -3
Query: 331 QDHHRGPAP-RHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRSP-HHFHCS 164
Q HRGP+ RH S +ER R SE RHR+ R S R P HCS
Sbjct: 590 QRSHRGPSQRRHHSPSERSHRSPSERSHRSSSER-RHRSPSQR---SHRGPSERSHCS 643
>U82468-1|AAB53700.1| 542|Homo sapiens tubby related protein 1
TULP1 protein.
Length = 542
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGP-APRHSEKHSASEADRAERFCRERSETPRH----RNKPSRP 203
TLR V + + GH++ P APR ++ A A+R ++R+E P +KP +P
Sbjct: 7 TLREVWASDSGHEEESLSPEAPRRPKQRPAP----AQRLRKKRTEAPESPCPTGSKPRKP 62
Query: 202 VWSRR 188
RR
Sbjct: 63 GAGRR 67
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -3
Query: 352 QSREQGHQDHHRGPAPRHSE-KHSASEADRAERFCRERSETPRHR-NKPSRPVWSRRSPH 179
+SR + + + HS+ KHS A R R R RS +PR R + P R R P
Sbjct: 768 RSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPT 827
Query: 178 HFHCS 164
+ S
Sbjct: 828 AYRVS 832
>AF034923-1|AAB97966.1| 542|Homo sapiens tubby like protein 1
protein.
Length = 542
Score = 29.9 bits (64), Expect = 8.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = -3
Query: 367 TLRAVQSREQGHQDHHRGP-APRHSEKHSASEADRAERFCRERSETPRH----RNKPSRP 203
TLR V + + GH++ P APR ++ A A+R ++R+E P +KP +P
Sbjct: 7 TLREVWASDSGHEEESLSPEAPRRPKQRPAP----AQRLRKKRTEAPESPCPTGSKPRKP 62
Query: 202 VWSRR 188
RR
Sbjct: 63 GAGRR 67
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 29.9 bits (64), Expect = 8.3
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -3
Query: 349 SREQGHQDHHRGP--APRHSEKHSASEADRAERFCRERSETPRHRNKPSRPVWSRRSPHH 176
+R H P +PR+++ S S R+ S R+ PSR SRRSP +
Sbjct: 495 TRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSY 554
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,372,828
Number of Sequences: 237096
Number of extensions: 1738522
Number of successful extensions: 5448
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 5062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5441
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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