Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021145
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    26   1.5  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   5.9  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.9  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.9  

>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 141 WLQSYIAREEGEDFGSISWAFAASEELTCASLSIKVRTRCT 263
           W +S +    G DF +   AF +   L CA    ++R   T
Sbjct: 469 WQRSQVDLRAGIDFSAAGSAFVSFTHLQCAPFVYRLRINST 509


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -2

Query: 298 VELHRPVDAAALVQRVRTFIDKLA 227
           +EL +  DAA+L+QR++  +  LA
Sbjct: 175 LELKKDTDAASLLQRIQQEVGDLA 198


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 466 DKGASLGVRVLPEQLGVLPAHGAV 395
           D GAS   RV PE+L  + AH A+
Sbjct: 426 DSGASDFDRVTPEELQEIAAHMAI 449


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +3

Query: 33   ADRWRRACDGAE--TAPXS-GW-HAAALHATNVFRKVEPDWLQSYIAREE 170
            AD W R C+GA+  TA     W    A  A NV  + + D  +    R E
Sbjct: 1053 ADSWSRICEGAKRITAQLQRAWDEERAALAVNVIERQDEDAAELEAQRAE 1102


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 342 FVGLSLNVTVVGFSSSNFTVQSMRPLSYS 256
           F  L  N T +  +S NF+  SM  LSYS
Sbjct: 592 FYDLIKNKTDIRLTSINFSDDSMIDLSYS 620


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,487
Number of Sequences: 2352
Number of extensions: 14071
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)