Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021145
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81552-7|CAB04487.2|  606|Caenorhabditis elegans Hypothetical pr...    40   0.002
AL117201-5|CAB57916.1|  606|Caenorhabditis elegans Hypothetical ...    40   0.002
AF250925-1|AAF74721.1|  542|Caenorhabditis elegans PNGase protein.     40   0.002
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    30   1.6  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    30   1.6  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     30   1.6  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    30   1.6  
Z93391-3|CAB07682.1|  363|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z54327-10|CAH04696.1|  596|Caenorhabditis elegans Hypothetical p...    28   8.4  

>Z81552-7|CAB04487.2|  606|Caenorhabditis elegans Hypothetical
           protein F56G4.5 protein.
          Length = 606

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 75  PXSGWHAAALHATNVFRKVEPDWLQSYIAREEGEDFGSISWAF 203
           P  G+ A A    NV R  E DW  +Y+ R+ G+  G+ISW F
Sbjct: 462 PEIGFSAQAFELENVQRVEETDWNMTYLCRKRGDAPGNISWHF 504



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 371 IKAELSGGDGPVRWQHAQLFR 433
           I A LSGG+G + +Q AQ+FR
Sbjct: 564 ITATLSGGEGAIGFQQAQIFR 584


>AL117201-5|CAB57916.1|  606|Caenorhabditis elegans Hypothetical
           protein F56G4.5 protein.
          Length = 606

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 75  PXSGWHAAALHATNVFRKVEPDWLQSYIAREEGEDFGSISWAF 203
           P  G+ A A    NV R  E DW  +Y+ R+ G+  G+ISW F
Sbjct: 462 PEIGFSAQAFELENVQRVEETDWNMTYLCRKRGDAPGNISWHF 504



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 371 IKAELSGGDGPVRWQHAQLFR 433
           I A LSGG+G + +Q AQ+FR
Sbjct: 564 ITATLSGGEGAIGFQQAQIFR 584


>AF250925-1|AAF74721.1|  542|Caenorhabditis elegans PNGase protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +3

Query: 75  PXSGWHAAALHATNVFRKVEPDWLQSYIAREEGEDFGSISWAF 203
           P  G+ A A    NV R  E DW  +Y+ R+ G+  G+ISW F
Sbjct: 398 PEIGFSAQAFELENVQRVEETDWNMTYLCRKRGDAPGNISWHF 440



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 371 IKAELSGGDGPVRWQHAQLFR 433
           I A LSGG+G + +Q AQ+FR
Sbjct: 500 ITATLSGGEGAIGFQQAQIFR 520


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 ARAVRERPHRLDGEVRR*KPYHGH-VER*TNEVRTKVS 360
           AR ++E P+R  GE R  +PYH   VER  +  RT VS
Sbjct: 17  ARDLQENPNRQPGEPRVSEPYHNSIVERIRHIFRTAVS 54


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 ARAVRERPHRLDGEVRR*KPYHGH-VER*TNEVRTKVS 360
           AR ++E P+R  GE R  +PYH   VER  +  RT VS
Sbjct: 17  ARDLQENPNRQPGEPRVSEPYHNSIVERIRHIFRTAVS 54


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 ARAVRERPHRLDGEVRR*KPYHGH-VER*TNEVRTKVS 360
           AR ++E P+R  GE R  +PYH   VER  +  RT VS
Sbjct: 17  ARDLQENPNRQPGEPRVSEPYHNSIVERIRHIFRTAVS 54


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 250 ARAVRERPHRLDGEVRR*KPYHGH-VER*TNEVRTKVS 360
           AR ++E P+R  GE R  +PYH   VER  +  RT VS
Sbjct: 17  ARDLQENPNRQPGEPRVSEPYHNSIVERIRHIFRTAVS 54


>Z93391-3|CAB07682.1|  363|Caenorhabditis elegans Hypothetical
           protein W04G5.5 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 72  APXSGWHAAALHATNVFRKVEPDWLQSYIAREEGEDFGSISWAF 203
           +P  G+ + A +  N+ R  EPD +  ++ +   E   +ISW F
Sbjct: 234 SPKEGFMSQAYYMDNIQRCEEPDHITVHLCKIFMEKTATISWHF 277


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
           protein C46C2.1b protein.
          Length = 1677

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = -3

Query: 393 PPDSSALMMTFRNFRANFVGLSLNVTVVGFSSSNFTVQSMRPLSYSACGPLSINWRTSAP 214
           P  SS   ++  N   N      NV+ +  SSS F++ S    + SA  P + N  T+ P
Sbjct: 91  PTTSSPSTVSISNALENSTPSLNNVSSITNSSSPFSLSSAATSTASAIIPFTSNVATNHP 150

Query: 213 H 211
           H
Sbjct: 151 H 151


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
           protein C46C2.1a protein.
          Length = 1838

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = -3

Query: 393 PPDSSALMMTFRNFRANFVGLSLNVTVVGFSSSNFTVQSMRPLSYSACGPLSINWRTSAP 214
           P  SS   ++  N   N      NV+ +  SSS F++ S    + SA  P + N  T+ P
Sbjct: 91  PTTSSPSTVSISNALENSTPSLNNVSSITNSSSPFSLSSAATSTASAIIPFTSNVATNHP 150

Query: 213 H 211
           H
Sbjct: 151 H 151


>Z54327-10|CAH04696.1|  596|Caenorhabditis elegans Hypothetical
           protein C26D10.7 protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 373 DDDLPKLSCELRWFIAQRDRGRVFI-VELHRPVDAAALVQRVRTFID 236
           +DD+PKL C++R+   +  +   F+ V+L +P   A  V  V  F++
Sbjct: 179 EDDIPKLCCDVRF---KPYKNMTFLAVKLEQPTTYATFVYAVYDFVN 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,846,846
Number of Sequences: 27780
Number of extensions: 332865
Number of successful extensions: 1073
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)