Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021143X
(501 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 157 7e-40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 157 9e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 157 9e-40
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 93 2e-20
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 85 6e-18
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 59 3e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 45 6e-06
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 1e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.22
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 29 0.30
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 29 0.39
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 1.2
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 1.2
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 27 1.6
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.6
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 26 2.8
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 4.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 6.4
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 25 6.4
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 25 8.4
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 25 8.4
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 25 8.4
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 25 8.4
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 157 bits (382), Expect = 7e-40
Identities = 75/99 (75%), Positives = 83/99 (83%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E E G G+ FKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CAVL + GTGEFEAGISK+GQTR
Sbjct: 96 RDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTR 134
Score = 107 bits (257), Expect = 9e-25
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKG
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKG 52
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 157 bits (381), Expect = 9e-40
Identities = 74/99 (74%), Positives = 83/99 (83%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E E G G+ FKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CA+L + GTGEFEAGISK+GQTR
Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Score = 107 bits (257), Expect = 9e-25
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKG
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKG 52
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 157 bits (381), Expect = 9e-40
Identities = 74/99 (74%), Positives = 83/99 (83%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
+ + +E E G G+ FKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGH
Sbjct: 40 EKFEKEATELGKGS----FKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGH 95
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFIKNM+TGTSQA CA+L + GTGEFEAGISK+GQTR
Sbjct: 96 RDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTR 134
Score = 107 bits (257), Expect = 9e-25
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKG
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKG 52
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 93.5 bits (222), Expect = 2e-20
Identities = 47/99 (47%), Positives = 57/99 (57%)
Frame = +2
Query: 203 QTYHREVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGH 382
Q H E G G+ F YAW+LD + ER RG+T+D+A FE+ K I DAPGH
Sbjct: 210 QKLHNEAANSGKGS----FSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGH 265
Query: 383 RDFIKNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
RDFI M+ G S A AVL V + FE G +NGQTR
Sbjct: 266 RDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTR 304
Score = 52.0 bits (119), Expect = 5e-08
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 111 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKG 254
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKG
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKG 222
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 85.0 bits (201), Expect = 6e-18
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = +2
Query: 215 REVREGGPGNG*RTFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 394
RE +E G ++ +W LD ERE+G T+++ FET +++DAPGH+ ++
Sbjct: 275 REAKEAGK----ESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYV 330
Query: 395 KNMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
NM+ G SQA VL +SA GEFEAG + GQTR
Sbjct: 331 TNMINGASQADIGVLVISARRGEFEAGFERGGQTR 365
Score = 66.5 bits (155), Expect = 2e-12
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +3
Query: 111 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 251
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGK 282
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 59.3 bits (137), Expect = 3e-10
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 275 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAG 454
+DK E+ RGITI A ++ET+ + +D PGH D+IKNM+TG + A++ VSA
Sbjct: 91 IDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSAT 150
Query: 455 TGE 463
G+
Sbjct: 151 DGQ 153
Score = 35.1 bits (77), Expect = 0.006
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +3
Query: 105 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 191
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 45.2 bits (102), Expect = 6e-06
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 272 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMMTGTS--QAACAVLTV 445
V+D L AER+RGITI+ A F + +ID PGH DF + + A A++
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 446 SAG 454
SAG
Sbjct: 127 SAG 129
Score = 28.7 bits (61), Expect = 0.52
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCG 194
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 44.0 bits (99), Expect = 1e-05
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 275 LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMMTGTSQAACAVLT 442
LDKL+ ER RGIT+ ++ + Y + +ID PGH DF +M + +L
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 443 VSAGTG 460
V A G
Sbjct: 155 VDASQG 160
Score = 24.6 bits (51), Expect = 8.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 206
N VI H+D GKST + ++ G I++
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINE 87
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 194
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 99 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 194
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.22
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 278 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 400
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.5 bits (63), Expect = 0.30
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 230 GGPGNG*RTFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNM 403
G +G T A+ + + GIT I + F+ ++T +D PGH F
Sbjct: 178 GHVDHGKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMR 237
Query: 404 MTGTSQAACAVLTVSAGTG 460
G + A VL V+ G
Sbjct: 238 KRGANIADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 29.1 bits (62), Expect = 0.39
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 123 NIVVIGHVDSGKSTTTGHLIYKCGGI 200
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
Score = 29.1 bits (62), Expect = 0.39
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 19/94 (20%)
Frame = +2
Query: 275 LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIK 397
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTI 160
Query: 398 NMMTGTSQAACAVLTVSAGTGEFEAGISKNGQTR 499
+ AVL + A +G I+ + Q R
Sbjct: 161 EVERALRVLDGAVLVLCAVSGVQSQTITVDRQMR 194
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.5 bits (58), Expect = 1.2
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -3
Query: 445 YGEHSASGLRGSCHHVLDEISVSRSINDGNIVLASLELPE---SNIDCDTTLTLSL*FVQ 275
+ S+ R S +LDE+ S S ++ + LEL E S++ C + + F
Sbjct: 17 HSPESSRETRFSAQQLLDELKDSYS--SPSVAIQLLELNEQAFSSLGCKLDIHIVQHFSL 74
Query: 274 YPSIFEGPLPISWASFSN 221
S+FE + ++W SFSN
Sbjct: 75 --SLFETSVGMNWKSFSN 90
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.5 bits (58), Expect = 1.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 362 IIDAPGHRDFIKNMMTGTSQAACAVLTV 445
IID PGH F GTS A+L +
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 1.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 105 KEKTHINIVVIGHVDS----GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGPSNMLG 272
KE ++N+V D S++T + + K GI + +EK + G +N L
Sbjct: 288 KENVNLNLVKTPKYDDLTKMNLSSSTANTLIK--GIQSYNFQNYEKAYSLLAAGVTNSLL 345
Query: 273 YWTN 284
WTN
Sbjct: 346 EWTN 349
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 350 YYVTIIDAPGHRDFIKNMMTGTSQAACAVLTVSAGTG 460
Y + +ID+PGH DF + + + A + V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 2.8
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -3
Query: 478 DTSFEFTGTGRYGEHSASGLRGSCHHVLDEISVSRSINDGNIVLASLELPESNI 317
D +F+G GE LRG+ H +LDE R+I+D VL S + ES +
Sbjct: 353 DKMIKFSGV-EAGEACTIVLRGATHQLLDE--SERAIHDALAVL-SQTVAESRV 402
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 4.8
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 353 YVTIIDAPGHRDFIKNMMTGTSQAACAVLTVS 448
+V+ +D PGH + M+ G + A+L ++
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 93 PKMGKEKTHINIVVIGHVDSGKST 164
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 6.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 240 PGPPSRTSRWYVCQYHHIC 184
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.0 bits (52), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 330 QRAISIVIPRSRSAFSLSNTQAYLKVLYPF 241
Q A+S +IP++RSA N LK L +
Sbjct: 33 QAAVSQLIPQARSAIQTGNALQGLKTLLSY 62
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -3
Query: 439 EHSASGLRGSCHHVLDEISVSRSINDGNIVLASL 338
+ ++ +R +CHH LD+ + I N+ A++
Sbjct: 400 QDTSPSIRTNCHHCLDDGMQASGIVQSNLTSAAM 433
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -1
Query: 330 QRAISIVIPRSRSAFSLSNTQAYLKVLYPFPGPPSRTSR 214
++A+ ++ R + L Q L V+Y P P ++ S+
Sbjct: 126 KKAVEMIKRRDKKVKELEKIQKELLVVYELPDPETKKSK 164
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 24.6 bits (51), Expect = 8.4
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Frame = -3
Query: 457 GTGRYGEHSASGLRGSCHHVLDEISVSRSINDGNIVLASLEL---PESNIDCDTTLTLSL 287
GTG H A L H + S++ G + L L P S + D+TLT L
Sbjct: 72 GTGAI-PHQAHLLLSDTEHPTLAVIYPASVSQGGVASLELRLFDIPTSLLRSDSTLTAKL 130
Query: 286 *FVQYPSIFEGPLPISWASFS 224
+ LP+ S +
Sbjct: 131 LVASFGETIPFSLPLGQLSIN 151
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 270 QAYLKVLYPFPGPPSRTSRWYVCQY 196
+A+LK L +PGP S +++ V ++
Sbjct: 422 KAFLKALKNYPGPRSMLTKYKVIEF 446
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,036,144
Number of Sequences: 5004
Number of extensions: 38873
Number of successful extensions: 148
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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