Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021142
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 111 8e-26
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 85 8e-18
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 85 1e-17
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 77 4e-15
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 72 8e-14
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 71 1e-13
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 71 1e-13
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 70 3e-13
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 70 4e-13
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 69 5e-13
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 67 3e-12
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 64 2e-11
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 64 3e-11
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 59 6e-10
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 55 9e-09
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 53 4e-08
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 49 8e-07
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 44 3e-05
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 41 2e-04
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 35 0.014
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.2
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 27 3.8
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 27 3.8
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 27 3.8
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 26 6.6
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ... 26 6.6
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 8.7
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 8.7
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak... 25 8.7
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 8.7
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 111 bits (268), Expect = 8e-26
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD IDPA++RPGRLDQLIY+PLPDE++R +IL+ LR +P+A+DVDL +AK T G
Sbjct: 641 ATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHG 700
Query: 566 FSGADLTEICQRACKL 519
FSGADL + QRA KL
Sbjct: 701 FSGADLEFVVQRAVKL 716
Score = 69.7 bits (163), Expect = 4e-13
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ IDPA+ R GR D+ + + +PD R ILR + + +A DVDL IA T G
Sbjct: 366 ATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHG 425
Query: 566 FSGADLTEICQRA 528
+ G+DL +C A
Sbjct: 426 YVGSDLASLCSEA 438
Score = 56.0 bits (129), Expect = 5e-09
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = -2
Query: 424 VPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNAGATGG 257
V ++ R H EEAMK ARRSVSD ++R+YE +A L SRG T F+F + T G
Sbjct: 748 VSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGL-TGFQFDSADSNTNG 802
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 85.4 bits (202), Expect = 8e-18
Identities = 37/73 (50%), Positives = 55/73 (75%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD+IDPA++RPGRLD+L+Y+ P+ ++R+ I++ K A+DVDL IA+ T+G
Sbjct: 688 ATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEG 747
Query: 566 FSGADLTEICQRA 528
SGA++ +CQ A
Sbjct: 748 CSGAEVVALCQEA 760
Score = 54.0 bits (124), Expect = 2e-08
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQ 570
ATNRP+ ID A+ RPGRL++ I I +PD+ +R I++ L P D L +A T
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 569 GFSGADLTEICQRA 528
+ GADL + + A
Sbjct: 481 AYVGADLAAVVREA 494
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 84.6 bits (200), Expect = 1e-17
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN P+ +DPA+ RPGR D+ I++PLPD + R AIL + R P+ KDVDLS IA+ T G
Sbjct: 412 ATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSG 471
Query: 566 FSGADLTEICQRA 528
F+GADL + +A
Sbjct: 472 FAGADLANLINQA 484
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 76.6 bits (180), Expect = 4e-15
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNRPD +DPA+LRPGRLD+ I IPLP+E R IL+ +L K ++D + K+T
Sbjct: 276 MATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTD 335
Query: 569 GFSGADLTEICQRA 528
G +GADL + A
Sbjct: 336 GTNGADLRNVVTEA 349
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 72.1 bits (169), Expect = 8e-14
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR DI+DPA+LRPGR+D+ I P P ++R ILR + R + + +DL IA+
Sbjct: 290 MATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMN 349
Query: 569 GFSGADLTEICQRA 528
G SGA+L +C A
Sbjct: 350 GASGAELKGVCTEA 363
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 71.3 bits (167), Expect = 1e-13
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDL--SYIAKVTQ 570
TNRPD++DPA+LRPGR D+ I I PD RE I + +L+ A ++DL +A +T
Sbjct: 442 TNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTS 501
Query: 569 GFSGADLTEIC 537
GF+GAD+ +C
Sbjct: 502 GFTGADIMNVC 512
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ- 570
ATNRPDIIDPA+LRPGRLD+ + + LPD R IL+ +++P+ ++V+L + + +
Sbjct: 634 ATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERC 693
Query: 569 -GFSGADLTEICQRA 528
FSGADL + + A
Sbjct: 694 SNFSGADLAALVREA 708
Score = 60.9 bits (141), Expect = 2e-10
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD +D A+ R GR D+ I + +P + +RE ILR + ++ D D +AK T G
Sbjct: 320 ATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPG 379
Query: 566 FSGADLTEICQRA 528
+ GADL + A
Sbjct: 380 YVGADLKALTAAA 392
Score = 29.1 bits (62), Expect = 0.71
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 442 HGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQ 326
H P+ ++ A FE A K + SVSD D +KY+ A+
Sbjct: 731 HSALEPI-RVTNADFELAFKNIKPSVSDRDRQKYQRLAK 768
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 70.1 bits (164), Expect = 3e-13
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR D +DPA+LR GRLD+ + PLP+E++R ILR + RK I D++ +A+ T
Sbjct: 330 ATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDE 389
Query: 566 FSGADLTEICQRA 528
++GA L +C A
Sbjct: 390 YNGAMLKSVCVEA 402
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 69.7 bits (163), Expect = 4e-13
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRAN-LRKSPIAKDVDLSYIAKVTQ 570
ATNRP+ +DPA+ RPGR D+ Y PLP++++R IL N L SP + L ++A+ T
Sbjct: 519 ATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESYLLHLAESTS 578
Query: 569 GFSGADLTEICQRA 528
G+ GADL +C A
Sbjct: 579 GYGGADLKALCTEA 592
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 69.3 bits (162), Expect = 5e-13
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYIAKVTQ 570
ATNRPD +DPA+ RPGR D+ Y PLPD +R+ I+ + R P + S +A+ ++
Sbjct: 413 ATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSK 472
Query: 569 GFSGADLTEICQRA 528
G+ GADL +C A
Sbjct: 473 GYGGADLRALCTEA 486
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 66.9 bits (156), Expect = 3e-12
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPL-PDEKSREAILRANLRKSPIAKDVDLSYIAK-VT 573
ATNRPD++DP++LRPGR D+L+Y+ + E+S+ ++LRA + + + +DL+ IAK
Sbjct: 800 ATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCH 859
Query: 572 QGFSGADLTEICQRA 528
F+GAD+ +C A
Sbjct: 860 PNFTGADMYALCSDA 874
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 64.5 bits (150), Expect = 2e-11
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
AT RPD+IDPA+LRPGRLD+LI+ LP+E+ R +L+ + I L ++ +T G
Sbjct: 748 ATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDG 807
Query: 566 FSGADLTEI 540
++ ADL+ +
Sbjct: 808 YTYADLSSL 816
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ +D A++RPGR+D+ + LPD + R ILR + + I KD+ IA++
Sbjct: 324 ATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPS 383
Query: 566 FSGADLTEICQRA 528
+GA+L +C A
Sbjct: 384 QTGAELRSVCTEA 396
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 59.3 bits (137), Expect = 6e-10
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSP----IAKDVDLSYIAKV 576
TNR D+ID A+LRPGRL+ + I LPDE R IL+ + + + DVD+ +A +
Sbjct: 424 TNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASL 483
Query: 575 TQGFSGADLTEICQRA 528
T+ FSGA++ + + A
Sbjct: 484 TKNFSGAEIAGLIKSA 499
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 55.2 bits (127), Expect = 9e-09
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR +DPA++RPGR+D+ I PDE ++ I + K + +DV+L + +
Sbjct: 336 MATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKD 395
Query: 569 GFSGADLTEICQRA 528
SGA++ I A
Sbjct: 396 DLSGAEIKAIVSEA 409
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 53.2 bits (122), Expect = 4e-08
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIP-LPDEKSREAILRANLRKSPIAKDVDLSYIAKVT 573
+ATNR D +DPA+LRPGRLD+ I P D + R + + K ++ +VDL
Sbjct: 278 MATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRP 337
Query: 572 QGFSGADLTEICQRA 528
SGA + I Q A
Sbjct: 338 DASSGAQIAAIMQDA 352
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 48.8 bits (111), Expect = 8e-07
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPI-AKDVDLSYIAKVTQ 570
ATN P +D AI R R ++ IYIPLP+ +R + N+ K P D +AK+T
Sbjct: 271 ATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTD 328
Query: 569 GFSGADLTEICQRA 528
G+SG+D++ + + A
Sbjct: 329 GYSGSDISIVVRDA 342
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 43.6 bits (98), Expect = 3e-05
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDV-DLSYIAKVTQ 570
ATN P ID A R R + YIPLPDE +R L L+ + + D+ I K T+
Sbjct: 611 ATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLEDIEAIVKATE 668
Query: 569 GFSGADLTEICQRA 528
+SG+DLT + + A
Sbjct: 669 YYSGSDLTALAKDA 682
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQ 570
ATN P ID A R R + YIPLP++++R L L + DL + +T+
Sbjct: 531 ATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSHLLHNQVHCLTEEDLEELVNLTE 588
Query: 569 GFSGADLTEICQRA 528
G+SG+D+T + + A
Sbjct: 589 GYSGSDITALAKDA 602
Score = 28.7 bits (61), Expect = 0.94
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 424 VPEISRAHFEEAMKFARRSVSDNDIRKYE 338
+P IS HF+ +++ R SVS I +YE
Sbjct: 622 IPPISLNHFKASLRTIRPSVSQEGIHRYE 650
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 34.7 bits (76), Expect = 0.014
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYI-PLPDEKSREAILRANLRKSPIAKDV 600
+ TN P+ +DPA++RPGR+D Y+ E+ RE R +A D+
Sbjct: 344 MTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDL 394
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 720 PGHPASRPSGPAHLHPAAGREVPRGHPARQP 628
P P+ PS P L P+A +P G PA P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 621 FAKVGAQDGLAGLLVRQRDVD-ELVQTAGTQDGRVDDVRSVCG 746
FA + L+ ++++DVD EL++ G G VDD + V G
Sbjct: 187 FANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKG 229
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -1
Query: 371 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGTSAGD 237
LR HP+V D P+ P I S+R SAGD
Sbjct: 18 LRKNTWHPEVDDSEVPPSVFPEYPVHKAIQKTSDSFRKRNYSAGD 62
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 692 DQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYI 585
D L+ + L D+K REA LR+ K K+ LSY+
Sbjct: 303 DNLVVVNLLDQKGREAPLRSGFEKLCKRNKNPPLSYV 339
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 107 HAGQTDRTLVHGLSRWWRCPEVASETQFRCTG 202
HA T ++ G W RC +V Q+ CTG
Sbjct: 150 HAPWTLMRVISGHLGWVRCVDVEPGNQWFCTG 181
>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 174 RARHSLDVQVVVTPLLLERGLVAR*STVPPV-APAFVGNLKLVPKPR 311
RA +L+++ TPL +ER ++ PP ++ K VP P+
Sbjct: 183 RAAPNLEIKSTTTPLYMERASYLFGASNPPAYTYTYIPESKYVPGPK 229
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -3
Query: 135 TNVLSVCPACRP-TTPTWRLAPAG 67
TN C C+ TTP WR +P G
Sbjct: 629 TNPTPTCTNCQTRTTPLWRRSPDG 652
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 331 AQTLQQSRGFGTNFRFPTNAGATG 260
+ T + GT+F F +NAG+TG
Sbjct: 116 SNTANNNANTGTSFSFGSNAGSTG 139
>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 708
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 454 CRYGHGRGRPVPEISRAHFE-EA--MKFARRSVSDN 356
CR+ +PEI+ AHFE EA +KF +S+ N
Sbjct: 443 CRFRRNLINLLPEITVAHFEAEALDLKFVAKSLPSN 478
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 8.7
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Frame = -2
Query: 475 SPAASRRCRYGHGRGRPVPEISRAHFEEAMKFA-----RRSVSDNDIRKYEMFAQTLQQS 311
SPA S R R G+ P S + + E K +RSVS N + + LQ
Sbjct: 732 SPAPSTRARGQSVSGQQRPSSSMSLYGEYNKSQPQLSMQRSVSPNPLGPNRRSSSVLQSQ 791
Query: 310 RGFGTNFRFPTNAGATG 260
+ +N N G +G
Sbjct: 792 KSTSSNTSNRNNGGYSG 808
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,988,408
Number of Sequences: 5004
Number of extensions: 60972
Number of successful extensions: 180
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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