Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021142
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 102 4e-22
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 90 2e-18
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 77 1e-14
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 77 2e-14
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_732| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 63 2e-10
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 57 1e-08
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 57 1e-08
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 47 2e-05
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 46 3e-05
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 44 1e-04
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53227| Best HMM Match : rve (HMM E-Value=1.6e-18) 32 0.57
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.57
SB_8698| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15435| Best HMM Match : Fic (HMM E-Value=7.5) 30 1.7
SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24) 29 3.0
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 29 4.0
SB_2691| Best HMM Match : Luteo_Vpg (HMM E-Value=2.1) 29 4.0
SB_12879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2) 28 7.0
SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09) 28 9.3
SB_37999| Best HMM Match : RVT_1 (HMM E-Value=7.5e-10) 28 9.3
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 28 9.3
SB_22074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06) 28 9.3
SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23) 28 9.3
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 28 9.3
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 28 9.3
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 102 bits (244), Expect = 4e-22
Identities = 78/196 (39%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPDIIDPAILRPGRLDQLIYIPLPD+ DVDL Y+AKVT G
Sbjct: 455 ATNRPDIIDPAILRPGRLDQLIYIPLPDD-----------------GDVDLDYVAKVTHG 497
Query: 566 FSGADLTEICQRACKLXXXXXXXXXXXXRGVASSKPPLPLWTWTRKTRSGD*PRSLRGGD 387
FSGADLTEICQRACKL P L + + D +R D
Sbjct: 498 FSGADLTEICQRACKLAIREAIETDINREKQRVDNPDLDM-----EVEDEDPVPEIR-KD 551
Query: 386 EVRAPLRVRQRHPQVRDVR-----ADPAAEPR-LRNQLQIPNK-----RGSYRGHGTSAG 240
++ +R D+R A + R + PN+ +G G G +G
Sbjct: 552 HFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFPNQGTGGSQGGAGGAGGGSG 611
Query: 239 D-QPTFQEEGGDDDLY 195
D Q + GDDDLY
Sbjct: 612 DNQGDLYGDDGDDDLY 627
Score = 101 bits (241), Expect = 8e-22
Identities = 50/58 (86%), Positives = 52/58 (89%)
Frame = -2
Query: 427 PVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNAGATGGT 254
PVPEI + HFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFG NFRFP N G TGG+
Sbjct: 544 PVPEIRKDHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFP-NQG-TGGS 599
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYI 585
ATNRP+ +D A+ R GR D+ + I +PD R ILR + + + DVDL I
Sbjct: 203 ATNRPNSVDVALRRFGRFDREVDIGIPDATGRLEILRIHTKNMKLGDDVDLEQI 256
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ ID A+LRPGR+D +IY+P PD K+R ILR + R SP+A DVDLS IA+ T+
Sbjct: 704 ATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTEL 763
Query: 566 FSGADLTEICQ 534
+SGADL +C+
Sbjct: 764 YSGADLENLCR 774
Score = 77.0 bits (181), Expect = 2e-14
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ +DPA+ RPGR D+ + I +P R ILRA+ + ++ DVDL+++A++T G
Sbjct: 356 ATNRPNALDPALRRPGRFDREVVIGVPSAGQRLDILRAHCKPINLSVDVDLTHLAEITVG 415
Query: 566 FSGADLTEICQRA 528
+ GADL +CQ+A
Sbjct: 416 YVGADLASLCQQA 428
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ ID A+LRPGR+D +IY+P PD K+R ILR + R SP+A DVDLS IA+ T+
Sbjct: 237 ATNRPEAIDGALLRPGRIDCMIYVPPPDMKARLEILRVHTRFSPLAPDVDLSVIAEGTEL 296
Query: 566 FSGADLTEICQ 534
+SGADL +C+
Sbjct: 297 YSGADLENLCR 307
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/73 (46%), Positives = 53/73 (72%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD+ID A++RPGR+D+LIY+PLP +R IL +L ++P +DL + + T+G
Sbjct: 680 ATNRPDMIDKALMRPGRVDRLIYVPLPCWDTRRHILEIHLARTPCEGSLDLEDLVERTEG 739
Query: 566 FSGADLTEICQRA 528
+SGA++ +C+ A
Sbjct: 740 YSGAEIAAVCREA 752
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIA-KDVDLSYIAKVTQ 570
ATNRPD +DPA+ RPGR D+ I I +P R IL L+ P + D D+S +A+
Sbjct: 401 ATNRPDALDPALRRPGRFDREIEIGIPSVTDRRDILVTLLKNVPHSLHDEDISSLAESAH 460
Query: 569 GFSGADLTEICQRA 528
G+ GADL C+ A
Sbjct: 461 GYVGADLAAACKEA 474
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
AT+RPD+IDPA+LRPGRLD+ +Y P+PD+ R + RA P+A D+DL I+
Sbjct: 809 ATSRPDLIDPALLRPGRLDKCVYCPIPDQGDRREVFRALSHDLPLADDIDLDSISDSCHH 868
Query: 566 FSGADL 549
F+GAD+
Sbjct: 869 FTGADI 874
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -1
Query: 692 DQLIYIPLPDEKSREAILRANLRKS---PIAKDVDLSYIAKVTQGFSGADLTEICQRA 528
+ ++ + LPDE+ R +L A ++ A ++D+S +AK GFS DL + RA
Sbjct: 563 ENIVELSLPDERQRLDMLSALAKRKLRGACADNLDMSLVAKKADGFSPKDLNSLVDRA 620
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAK----V 576
TNRPD++DPA+LRPGR D+ I++P PD K R +I + +L+ PI K+VD +A+ +
Sbjct: 194 TNRPDVLDPALLRPGRFDRQIHLPAPDIKGRCSIFKVHLK--PIKKNVDEEKLARKMAAL 251
Query: 575 TQGFSGADLTEICQRA 528
T GF+GAD+ +C A
Sbjct: 252 TPGFTGADIANVCNEA 267
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR DI+DPA+LR GRLD+ I P PD+++R IL+ + RK ++ DV+ +++ T
Sbjct: 238 ATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDD 297
Query: 566 FSGADLTEICQRA 528
F+GA L +C A
Sbjct: 298 FNGAMLKAVCVEA 310
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILR---ANLRKSPI-AKDVDLSYIAKV 576
TNR D+ID A+LRPGRL+ + I LPDE+ R IL+ A +R++ + A DVDL+ +A
Sbjct: 303 TNRRDLIDDALLRPGRLEVQVEIGLPDEEGRVQILKIHTAKMRENKVLADDVDLAELATQ 362
Query: 575 TQGFSGADLTEICQRA 528
T+ F+GA++ + + A
Sbjct: 363 TKNFTGAEIEGLVRAA 378
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVD--LSYIAKVT 573
+TNR DI+D A+LRPGR D+ I I LP R I +L+K + + +D +A++T
Sbjct: 270 STNRADILDNALLRPGRFDRHIAIDLPTLPERMEIFEVHLKKLTLKRSIDQYTKRLAELT 329
Query: 572 QGFSGADLTEICQRA 528
G SGAD+ IC A
Sbjct: 330 PGHSGADIANICNEA 344
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPL-PDEKSREAILRANLRKSPIAKDVDLSYIA-KVT 573
ATNRPD++DPA+LRPGR D+L+Y+ + D ++ ++L+A RK + D L A K+
Sbjct: 954 ATNRPDLLDPALLRPGRFDKLLYLGVSEDHHAQLSVLKALTRKFTFSADFRLEEFANKLP 1013
Query: 572 QGFSGADL 549
+GADL
Sbjct: 1014 LNLTGADL 1021
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK-SPIAKDVDLSYIAKVTQ 570
ATNR D IDPA+ RPGR D+ LPD +R +IL + R+ P +S +A
Sbjct: 1031 ATNRIDAIDPALRRPGRFDREFQFALPDRDARRSILSIHTREWEPRLSQRFISELADYCV 1090
Query: 569 GFSGADLTEICQRA 528
G+ GAD+ +C A
Sbjct: 1091 GYCGADIKALCTEA 1104
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDL 594
+ATNR D +DPA+LRPGRLD+ I PLPD + + I K ++++VDL
Sbjct: 308 MATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDL 359
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANL 627
ATNRPD +DPA+ R GR D+ I + +PDE +R I+ A+L
Sbjct: 820 ATNRPDSLDPALRRAGRFDREISMGIPDESARARIVGADL 859
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPD 663
+ATNRPD +DPA++RPGRLD+ + LPD
Sbjct: 228 MATNRPDTLDPALMRPGRLDRKVEFGLPD 256
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKS-PIAKDVDLSYIAKVTQ 570
ATN P +D AI R R ++ IYIPLP++ +R + +L S + ++ + + T
Sbjct: 275 ATNIPWTLDSAIRR--RFEKRIYIPLPEQAARSKMFELHLGGSKTLLGAQEIKQLGQKTD 332
Query: 569 GFSGADLTEICQRA 528
G+SGAD++ + + A
Sbjct: 333 GYSGADISVVVREA 346
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEK 657
+ATNR DI+D A+LRPGR+D+ I P P+E+
Sbjct: 335 MATNRIDILDSALLRPGRIDRKIEFPPPNEE 365
>SB_3478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -1
Query: 698 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADL 549
R+D+ I P+PDEK++ I + ++ +A+DV+L SGAD+
Sbjct: 2 RIDRKIEFPMPDEKTKRRIFNIHTQRMTLAEDVNLEEFIMAKDDLSGADI 51
>SB_53227| Best HMM Match : rve (HMM E-Value=1.6e-18)
Length = 305
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 371 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGTSAGDQPTFQEEG 213
+++R R Q R +A P PR RN KRG G G +A D P ++G
Sbjct: 234 IKLRARASQSR--KASPRGPPRGRNGGVHRRKRGRPSGQGPTASDGPVVDKQG 284
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -2
Query: 454 CRYGHGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNF-RFPT 278
C G G G P P + K + R++SD ++ Y F + FG N+ P
Sbjct: 962 CPAGAG-GPPPPTWTSYDGNIIQKMSGRNISDYLLKTYMKFVKKRYGGLSFGDNYNNLPA 1020
Query: 277 NAGATGGTVLQRATSPRS 224
N + ++R SPR+
Sbjct: 1021 NVRNSSDPAIRRLISPRN 1038
>SB_8698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.9 bits (69), Expect = 0.57
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 371 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGTSAGDQPTFQEEG 213
+++R R Q R +A P PR RN KRG G G +A D P ++G
Sbjct: 93 IKLRARASQSR--KASPRGPPRGRNGGVHRRKRGRPSGQGPTASDGPVVDKQG 143
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 347 QVR-DVRADPAAEPRLRNQLQIPNKRGSYRGHGTSAGDQ 234
QVR D+R DP + R R+ ++ P + S R T A DQ
Sbjct: 683 QVRSDLRGDPRYDSRRRSDVRSPERPSSARNSDTKATDQ 721
>SB_15435| Best HMM Match : Fic (HMM E-Value=7.5)
Length = 695
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 509 GEWPACRLAGISPSGQRH*SLASPWR 586
GEW +G+ P GQ H + PWR
Sbjct: 533 GEWGLVDASGVRPGGQGHVGVQYPWR 558
>SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24)
Length = 1065
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = -1
Query: 284 PNKRGSYRGHGTSAGDQPTFQEEGGD--DDLYI*TVSRSRPRGI---STISIDHELTSCL 120
P + G + GT AG P + +G D D L V + GI S++S+DH S L
Sbjct: 63 PREFGGIKITGTKAGTGPPLEVDGIDKLDVLPFRRVPEAADSGIDSSSSLSVDHAARSDL 122
Query: 119 FVLRVAPP 96
+ +PP
Sbjct: 123 GLCSTSPP 130
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 732 GHHRPGHPASRPSGPAHLHPAAGREVPRGHPAR 634
G H P +S PS + G EVP+G AR
Sbjct: 1018 GEHHPATGSSPPSSEIEVEIGVGEEVPQGTEAR 1050
>SB_2691| Best HMM Match : Luteo_Vpg (HMM E-Value=2.1)
Length = 332
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 356 RHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGTSAGDQPTFQEEGGDD 204
+ P V D ADP + +++++L GHG G +GGDD
Sbjct: 82 QRPAVIDESADPDKQNKMQDELSKKKLENLENGHGGGGGSNGEV-SDGGDD 131
>SB_12879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 95 VVGRHAGQTDRTLVHGLSRWWRCPEVASETQFRCTGRRHPPPPGT 229
V R AG R L W P++ + + F T +R PPPP T
Sbjct: 489 VTPREAGMALRATK--LEGWLSSPDIEAGSCFSNTKQRPPPPPAT 531
>SB_58910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 599 DLSYIAKVTQGFSGADLTEICQRA 528
D + K++ GF+GADL +C A
Sbjct: 115 DYEAVVKLSDGFNGADLRNVCTEA 138
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -3
Query: 720 PGHPASRPSGPAHLHPAAGREVPRGHPARQPSQIAYR*G 604
PG PA PSG + +P P P +QP Q R G
Sbjct: 722 PGSPAGSPSGTSAGNPQQQPPPPGQLPGQQPGQAGGRPG 760
>SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2)
Length = 939
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 720 PGHPASRPSGPAHLHPAAGREVPRGHPARQP 628
PG+PA P PA + P +VP G+PA+ P
Sbjct: 873 PGYPAQAPGYPAQV-PGYPAQVP-GYPAQAP 901
>SB_38321| Best HMM Match : ZZ (HMM E-Value=8.1e-09)
Length = 584
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 612 DRRFAKVGAQDGLAGLLVRQRDVDELVQTAGTQDGRVDDVRS 737
++ FA+ GAQD L GLL D V TA T D +VD R+
Sbjct: 380 EKLFAR-GAQDRLLGLLGAVLPTDSKVDTART-DFKVDTART 419
>SB_37999| Best HMM Match : RVT_1 (HMM E-Value=7.5e-10)
Length = 874
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1
Query: 632 NLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQR 531
N+R+ AKD L + K+T+ ADLTE QR
Sbjct: 566 NIRRET-AKDPSLQTLMKITKQGMSADLTEAVQR 598
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -3
Query: 735 TGHHRPGHPASRPSGPAHLHPAAGREVPRGHPARQPSQI 619
T HH HPA P P + A R R HPA P I
Sbjct: 399 TRHHHRRHPAPSPLTPGTI-TADTRHHHRRHPAPTPGTI 436
>SB_22074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 544 RYASEPASWPFAGHRGGDPSREESPAASR 458
RYA WP G+RGG R P SR
Sbjct: 407 RYAPPRPEWPM-GYRGGSEQRTRIPGRSR 434
>SB_3069| Best HMM Match : zf-C2H2 (HMM E-Value=1e-06)
Length = 625
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 744 HKQTGHHRPGHPASRPSGPAHLHPAAGREVPR 649
H QT HHRP P P+ P HP E+ R
Sbjct: 468 HMQTIHHRPYPPQYPPNMPRQ-HPQEHHEMQR 498
>SB_56337| Best HMM Match : RVT_1 (HMM E-Value=1.7e-23)
Length = 846
Score = 27.9 bits (59), Expect = 9.3
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 5/120 (4%)
Frame = -1
Query: 692 DQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG-----FSGADLTEICQRA 528
D L+ P+ E ++ SP+ LS + T+ ++ LTE QR
Sbjct: 589 DALVSSPVTAYFDPERRTEVSVDASPVGLAAILSQVEPKTEARHVITYASRSLTETEQRY 648
Query: 527 CKLXXXXXXXXXXXXRGVASSKPPLPLWTWTRKTRSGD*PRSLRGGDEVRAPLRVRQRHP 348
+ G A+SKPP + W + +S + G+E P RHP
Sbjct: 649 SQTEREALAVVWAYGYGNANSKPPARIERWALRLQSYQVTVKYQRGEE--NPADYLSRHP 706
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDE 660
ATN P +D A+ R RL++ IYIPLP +
Sbjct: 398 ATNFPWDLDEALRR--RLEKRIYIPLPTD 424
>SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0)
Length = 556
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 490 PSREESPAASRRCRYGHGRGRPVPEISRA 404
PS S AAS RCRY + R V +I A
Sbjct: 394 PSDSFSLAASNRCRYRQSQARSVDKIDAA 422
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = -2
Query: 523 SWPFAGHRGGDPSREESPAASRRCR-----YGHGRGRPVPEISRAHFEEAMKFARRSVSD 359
S PF+G +P+R E P +S R R Y R PE+ + ++ K A ++ D
Sbjct: 213 SLPFSGTLPSEPARVEQPPSSARSRKSGNLYDELRPYTAPELPK----KSGKPAGKNHFD 268
Query: 358 NDIRKYEMFAQTLQQS 311
N + Y +F + L S
Sbjct: 269 NLRQLYSLFEKQLSYS 284
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,217,815
Number of Sequences: 59808
Number of extensions: 596210
Number of successful extensions: 1910
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -