Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021142
(749 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 131 4e-31
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 129 2e-30
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 128 3e-30
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 89 2e-18
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 88 7e-18
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 83 1e-16
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 83 3e-16
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 81 1e-15
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 80 1e-15
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 77 9e-15
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 77 9e-15
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 77 2e-14
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 75 5e-14
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 75 7e-14
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 74 1e-13
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 73 2e-13
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 73 3e-13
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 73 3e-13
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 73 3e-13
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 72 4e-13
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 72 5e-13
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 71 6e-13
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 71 8e-13
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 70 1e-12
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 70 1e-12
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 70 1e-12
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 70 2e-12
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 69 3e-12
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 67 1e-11
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 67 1e-11
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 67 1e-11
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 67 1e-11
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 66 2e-11
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 66 3e-11
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 65 4e-11
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 65 4e-11
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 64 9e-11
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 64 9e-11
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 63 2e-10
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 62 4e-10
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 62 5e-10
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 61 9e-10
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 59 3e-09
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 58 6e-09
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 58 6e-09
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 58 6e-09
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 58 6e-09
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 56 3e-08
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 56 3e-08
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 55 4e-08
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 55 4e-08
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 52 5e-07
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 48 9e-06
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 46 2e-05
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 46 2e-05
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 36 0.005
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 36 0.029
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 36 0.038
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 31 0.045
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 34 0.12
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 34 0.12
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 33 0.15
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 33 0.15
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 33 0.27
At5g64750.1 68418.m08142 AP2 domain-containing transcription fac... 32 0.35
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 31 0.82
At4g27340.1 68417.m03923 Met-10+ like family protein ; contains... 31 1.1
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 31 1.1
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 31 1.1
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 30 1.4
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 30 1.4
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 30 1.4
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 30 1.4
At5g39020.1 68418.m04722 protein kinase family protein contains ... 30 1.9
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 29 2.5
At4g36910.1 68417.m05232 CBS domain-containing protein contains ... 29 2.5
At3g52080.1 68416.m05715 cation/hydrogen exchanger, putative (CH... 29 2.5
At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly id... 29 2.5
At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly id... 29 2.5
At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly id... 29 2.5
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 29 2.5
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 29 2.5
At5g53890.1 68418.m06703 leucine-rich repeat transmembrane prote... 29 3.3
At2g13800.1 68415.m01523 leucine-rich repeat family protein / pr... 29 3.3
At1g17540.1 68414.m02157 protein kinase-related similar to serin... 29 3.3
At5g38250.1 68418.m04611 serine/threonine protein kinase, putati... 29 4.4
At5g20050.1 68418.m02387 protein kinase family protein contains ... 29 4.4
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 28 5.8
At4g05340.1 68417.m00816 hypothetical protein 28 5.8
At4g03230.1 68417.m00442 S-locus lectin protein kinase family pr... 28 5.8
At1g33970.1 68414.m04212 avirulence-responsive protein, putative... 28 5.8
At5g38240.1 68418.m04610 serine/threonine protein kinase, putati... 28 7.6
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 28 7.6
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 28 7.6
At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger) fa... 28 7.6
At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family... 28 7.6
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 131 bits (317), Expect = 4e-31
Identities = 60/75 (80%), Positives = 68/75 (90%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPDIIDPA+LRPGRLDQLIYIPLPDE+SR I ++ LRKSP+AKDVDL +AK TQG
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQG 685
Query: 566 FSGADLTEICQRACK 522
FSGAD+TEICQR+CK
Sbjct: 686 FSGADITEICQRSCK 700
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/56 (69%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = -2
Query: 424 VPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP-TNAGATG 260
+ EI HFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG+ FRFP G TG
Sbjct: 731 IAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAPTGTTG 786
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/73 (47%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ IDPA+ R GR D+ I I +PDE R +LR + + +A+DVDL ++K T G
Sbjct: 350 ATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHG 409
Query: 566 FSGADLTEICQRA 528
+ GADL +C A
Sbjct: 410 YVGADLAALCTEA 422
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 129 bits (312), Expect = 2e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPDIID A+LRPGRLDQLIYIPLPDE SR I +A LRKSPIAKDVD+ +AK TQG
Sbjct: 626 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQG 685
Query: 566 FSGADLTEICQRACK 522
FSGAD+TEICQRACK
Sbjct: 686 FSGADITEICQRACK 700
Score = 86.6 bits (205), Expect = 2e-17
Identities = 45/66 (68%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Frame = -2
Query: 424 VPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNA--GATGGTV 251
V EI AHFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG+ FRF +A GAT G
Sbjct: 732 VSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGSGATTGVA 791
Query: 250 LQRATS 233
ATS
Sbjct: 792 DPFATS 797
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ IDPA+ R GR D+ I I +PDE R +LR + + +A+DVDL I+K T G
Sbjct: 349 ATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHG 408
Query: 566 FSGADLTEICQRA 528
+ GADL +C A
Sbjct: 409 YVGADLAALCTEA 421
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 128 bits (310), Expect = 3e-30
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPDIID A+LRPGRLDQLIYIPLPDE SR I +A LRKSP+AKDVD++ +AK TQG
Sbjct: 625 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQG 684
Query: 566 FSGADLTEICQRACK 522
FSGAD+TEICQRACK
Sbjct: 685 FSGADITEICQRACK 699
Score = 85.0 bits (201), Expect = 5e-17
Identities = 43/65 (66%), Positives = 48/65 (73%)
Frame = -2
Query: 424 VPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNAGATGGTVLQ 245
V EI AHFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG+ FRF + AG G T
Sbjct: 732 VSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFDSTAG-VGRTTGV 790
Query: 244 RATSP 230
A P
Sbjct: 791 AAADP 795
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+ IDPA+ R GR D+ I I +PDE R +LR + + +A+DVDL I+K T G
Sbjct: 349 ATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHG 408
Query: 566 FSGADLTEICQRA 528
+ GADL +C A
Sbjct: 409 YVGADLAALCTEA 421
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/73 (53%), Positives = 56/73 (76%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD ID A+LRPGR D+L+Y+ P+E REAIL+ +LRK P + D+ L +A +T+G
Sbjct: 868 ATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKG 927
Query: 566 FSGADLTEICQRA 528
++GAD++ IC+ A
Sbjct: 928 YTGADISLICREA 940
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR-KSPIAKDVDLSYIAKVTQ 570
ATNRPD I+PA+ RPGRLD+ I I +P R IL LR ++ + +A T
Sbjct: 526 ATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATH 585
Query: 569 GFSGADLTEICQRA 528
GF GADL+ +C A
Sbjct: 586 GFVGADLSALCCEA 599
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 87.8 bits (208), Expect = 7e-18
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVT-Q 570
ATNRPD++DPA LRPGR L+Y+PLP+ R +IL+A RK PI VDL IAK +
Sbjct: 669 ATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCE 728
Query: 569 GFSGADLTEICQRA 528
GFSGADL + Q+A
Sbjct: 729 GFSGADLAHLVQKA 742
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD +DPA+ R GR + I + PDE +R IL +K + D IA++T G
Sbjct: 385 ATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPG 444
Query: 566 FSGADLTEICQRA 528
F GADL + A
Sbjct: 445 FVGADLESVAYLA 457
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAK--DVDLSYIAKV 576
+ATNRPD++DPA+LRPGRLD+ I IPLP+E+SR IL+ + S IAK ++D I K+
Sbjct: 283 MATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHASGIAKHGEIDYEAIVKL 340
Query: 575 TQGFSGADLTEICQRA 528
+GF+GADL IC A
Sbjct: 341 GEGFNGADLRNICTEA 356
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 82.6 bits (195), Expect = 3e-16
Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAK--DVDLSYIAKV 576
+ATNRPD++DPA+LRPGRLD+ I IPLP+E+SR IL+ + + IAK ++D I K+
Sbjct: 283 MATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILK--IHAAGIAKHGEIDYEAIVKL 340
Query: 575 TQGFSGADLTEICQRA 528
+GF+GADL IC A
Sbjct: 341 AEGFNGADLRNICTEA 356
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/76 (51%), Positives = 50/76 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP+I+D A+LRPGR D+ + + LPD + RE IL+ + R + KDV LS IA T G
Sbjct: 367 ATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPG 426
Query: 566 FSGADLTEICQRACKL 519
FSGADL + A L
Sbjct: 427 FSGADLANLMNEAAIL 442
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN PDI+DPA+ RPGR D+ I +P PD + RE IL L+ P+++DVD+ IA+ T G
Sbjct: 502 ATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPG 561
Query: 566 FSGADLTEI 540
F+GADL +
Sbjct: 562 FNGADLANL 570
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKS--PIAKDVDLSYIAKVT 573
ATNR D++DPA+ RPGR D+++ + PD+ RE+ILR ++ K P+ DV+L IA +T
Sbjct: 470 ATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMT 529
Query: 572 QGFSGADLTEICQRACKL 519
GF+GADL + A L
Sbjct: 530 TGFTGADLANLVNEAALL 547
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 77.4 bits (182), Expect = 9e-15
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
+TNRPDI+DPA++RPGR D+ I+IP P R IL+ + RK P+A+D+D +A +T G
Sbjct: 554 STNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDG 613
Query: 566 FSGADLTEICQRA 528
GA+L I + A
Sbjct: 614 MVGAELANIVEIA 626
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKS--PIAKDVDLSYIAKVT 573
ATNR D++DPA+ RPGR D+++ + PD+ RE+IL+ ++ K P+ DV+L+ IA +T
Sbjct: 474 ATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMT 533
Query: 572 QGFSGADLTEICQRACKL 519
GF+GADL + A L
Sbjct: 534 TGFTGADLANLVNEAALL 551
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/73 (50%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
AT+RPD++DPA+LRPGRLD+L+ P R IL RK +A D+DL IA +T+G
Sbjct: 986 ATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEG 1045
Query: 566 FSGADLTEICQRA 528
FSGADL + A
Sbjct: 1046 FSGADLQALLSDA 1058
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 74.5 bits (175), Expect = 7e-14
Identities = 35/76 (46%), Positives = 47/76 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD++D A+LRPGR D+ + + PD R IL+ + R I KDVD +A+ T G
Sbjct: 394 ATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPG 453
Query: 566 FSGADLTEICQRACKL 519
F+GADL + A L
Sbjct: 454 FTGADLQNLMNEAAIL 469
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD++D A+LRPGR D+ + + PD R IL+ + R + KDVD +A+ T G
Sbjct: 406 ATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPG 465
Query: 566 FSGADLTEICQRACKL 519
F+GADL + A L
Sbjct: 466 FTGADLQNLMNEAAIL 481
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQ 570
ATN PD IDPA+ RPGR D+ IY PLP R AI+ + RK P L +IAK T
Sbjct: 866 ATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETA 925
Query: 569 GFSGADLTEICQRACKL 519
GF+GAD+ +C +A +
Sbjct: 926 GFAGADIQALCTQAAMI 942
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR DI+D A+LRPGR+D+ I P P+E+SR IL+ + RK + + +DL IA+
Sbjct: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMN 365
Query: 569 GFSGADLTEICQRA 528
G SGA+L +C A
Sbjct: 366 GASGAELKAVCTEA 379
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR DI+D A+LRPGR+D+ I P P+E+SR IL+ + RK + + +DL IA+
Sbjct: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMN 365
Query: 569 GFSGADLTEICQRA 528
G SGA+L +C A
Sbjct: 366 GASGAELKAVCTEA 379
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR + +DPA+LRPGR+D+ I PLPD K+R I + + K +A+DV+L
Sbjct: 332 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKD 391
Query: 569 GFSGADLTEICQRA 528
FSGAD+ IC A
Sbjct: 392 EFSGADIKAICTEA 405
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN P ID A+ R RL++ IYIPLPD +SR+A++ NLR +A DV++ +A+ T+G
Sbjct: 389 ATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEG 446
Query: 566 FSGADLTEICQRA 528
+SG DLT +C+ A
Sbjct: 447 YSGDDLTNVCRDA 459
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP ID A++RPGR D ++Y+P PD ++R IL+ + R + DVDL IA+ T
Sbjct: 432 ATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDL 491
Query: 566 FSGADLTEICQRA 528
F+GA+L +C+ +
Sbjct: 492 FTGAELEGLCRES 504
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
+TNR D IDPA+ R GR D L+ + P+E+ R IL+ +K + VDL IA G
Sbjct: 170 STNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNG 229
Query: 566 FSGADLTEICQRA 528
+ GADL +C+ A
Sbjct: 230 YVGADLEALCREA 242
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR + +DPA+LRPGR+D+ I PLPD K+R I + + K +++DV+L
Sbjct: 332 LATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKD 391
Query: 569 GFSGADLTEICQRA 528
FSGAD+ IC A
Sbjct: 392 EFSGADIKAICTEA 405
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN P+ +D A++RPGR D+ I +P PD + R IL +++ K A+DVDL IA+ T G
Sbjct: 368 ATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPG 427
Query: 566 FSGADLTEI 540
FSGADL +
Sbjct: 428 FSGADLANL 436
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR DI+DPA++R GRLD+ I P P E++R IL+ + RK + DV+ +A+ T
Sbjct: 316 ATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDD 375
Query: 566 FSGADLTEICQRA 528
F+GA L +C A
Sbjct: 376 FNGAQLKAVCVEA 388
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/76 (46%), Positives = 44/76 (57%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR DI+D A+LRPGR D+ + + +PD K R IL+ + DV L IA T G
Sbjct: 371 ATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPG 430
Query: 566 FSGADLTEICQRACKL 519
FSGADL + A L
Sbjct: 431 FSGADLANLLNEAAIL 446
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPL-PDEKSREAILRANLRKSPIAKDVDLSYIA-KVT 573
A+NRPD+IDPA+LRPGR D+L+Y+ + D RE +L+A RK +++DV L +A K
Sbjct: 802 ASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCP 861
Query: 572 QGFSGADLTEICQRA 528
F+GAD+ +C A
Sbjct: 862 STFTGADMYALCADA 876
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR DI+DPA++R GRLD+ I P P E++R IL+ + RK + DV+ +A+ T
Sbjct: 315 ATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDD 374
Query: 566 FSGADLTEICQRA 528
F+GA L +C A
Sbjct: 375 FNGAQLKAVCVEA 387
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNRPD +DPA+LRPGRLD+ + LPD +SR I + + R +D+ +A++
Sbjct: 312 MATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCP 371
Query: 569 GFSGADLTEICQRA 528
+GAD+ +C A
Sbjct: 372 NSTGADIRSVCTEA 385
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSY----IAKV 576
TNRPDI+D A+LRPGR D+ I I PD K R+ I + L+K I D + SY +A +
Sbjct: 467 TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKK--IKLDHEPSYYSQRLAAL 524
Query: 575 TQGFSGADLTEICQRA 528
T GF+GAD+ +C A
Sbjct: 525 TPGFAGADIANVCNEA 540
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/76 (44%), Positives = 43/76 (56%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR DI+D A+LRPGR D+ + + +PD K R IL+ + V L IA T G
Sbjct: 364 ATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPG 423
Query: 566 FSGADLTEICQRACKL 519
FSGADL + A L
Sbjct: 424 FSGADLANLLNEAAIL 439
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 66.9 bits (156), Expect = 1e-11
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNRPDI+DPA+LRPGRLD+ + LPD + R I + + R +D+ +A +
Sbjct: 349 MATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCP 408
Query: 569 GFSGADLTEICQRA 528
+GAD+ +C A
Sbjct: 409 NSTGADIRSVCIEA 422
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSY----IAKV 576
TNRPDI+D A+LRPGR D+ I I PD K R+ I + L+K I D + SY +A +
Sbjct: 473 TNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKK--IKLDHEPSYYSQRLAAL 530
Query: 575 TQGFSGADLTEICQRA 528
T GF+GAD+ +C A
Sbjct: 531 TPGFAGADIANVCNEA 546
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D AILR RL Q I +PD + R IL+ L+ + D+D +IA++ +G
Sbjct: 229 ATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIARLCEG 286
Query: 566 FSGADLTEICQRA 528
++G+D+ E+C++A
Sbjct: 287 YTGSDIFELCKKA 299
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
+ATNR D +DPA+LRPGRLD+ I PLPD + + + + K ++ +VDL
Sbjct: 299 MATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPD 358
Query: 569 GFSGADLTEICQRA 528
S A++ ICQ A
Sbjct: 359 KISAAEIAAICQEA 372
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNR D++DPA+LRPGR D+ I + P+ K R IL+ + K ++ VDLS A G
Sbjct: 582 ATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPG 641
Query: 566 FSGADLTEICQRA 528
+SGA L ++ Q A
Sbjct: 642 WSGAKLAQLVQEA 654
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + + + LPD +R IL L K +A+DVDL IA +T G
Sbjct: 1096 ATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDG 1153
Query: 566 FSGADLTEICQRACKL 519
+SG+DL +C A L
Sbjct: 1154 YSGSDLKNLCVTAAHL 1169
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 64.1 bits (149), Expect = 9e-11
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + + + LPD +R IL L K IA DVDL IA +T G
Sbjct: 1109 ATNRPFDLDEAVIR--RLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDG 1166
Query: 566 FSGADLTEICQRA 528
+SG+DL +C A
Sbjct: 1167 YSGSDLKNLCVTA 1179
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDL--SYIAKVT 573
ATNRP+ +D A+ RPGR + + + PD++ R IL +LR P+ +D L +A +T
Sbjct: 475 ATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLT 534
Query: 572 QGFSGADLTEICQRACKL 519
GF GADL I A L
Sbjct: 535 PGFVGADLANIVNEAALL 552
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIA-KDVDLSYIAKVTQ 570
ATN+P +D A+LR RL + IY+PLPD R+ + + L+ P + D D+ I K T+
Sbjct: 359 ATNKPQELDDAVLR--RLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETE 416
Query: 569 GFSGADLTEICQRACKL 519
G+SG+DL +C+ A +
Sbjct: 417 GYSGSDLQALCEEAAMM 433
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRPD +D +R GR+D+ +YI LPD K R I + +A+D+D + T G
Sbjct: 641 ATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVG 700
Query: 566 FSGADLTEICQRA 528
FSGAD+ + A
Sbjct: 701 FSGADIRNLVNEA 713
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + + LPD +SR IL+ L K ++ D D+ +A +T G
Sbjct: 869 ATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVASMTNG 926
Query: 566 FSGADLTEICQRACK 522
+SG DL +C A +
Sbjct: 927 YSGNDLKNLCVTAAR 941
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 60.9 bits (141), Expect = 9e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + + + LPD +R IL+ L K ++ D+D+ IA +T G
Sbjct: 966 ATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNG 1023
Query: 566 FSGADLTEICQRA 528
+SG+DL +C A
Sbjct: 1024 YSGSDLKNLCVTA 1036
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR----KSPIAKDVDLSYIAK 579
ATNR DI+DPA+LR GR D++I + LP + R AIL+ + R +S K+ L +A+
Sbjct: 462 ATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAE 521
Query: 578 VTQGFSGADLTEICQRA 528
T+ F+GA+L + A
Sbjct: 522 NTEDFTGAELQNVLNEA 538
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK----SPIAKDVDLSYIAKV 576
TNR D++D A+LRPGRL+ + I LPDE R IL+ + K S + D++L +A
Sbjct: 370 TNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAAR 429
Query: 575 TQGFSGADLTEICQRA 528
T+ +SGA+L + + A
Sbjct: 430 TKNYSGAELEGVVKSA 445
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D AI+R R ++ I + LP ++RE ILR L K + +++D +A +T+G
Sbjct: 666 ATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEG 723
Query: 566 FSGADLTEICQRA 528
++G+DL +C A
Sbjct: 724 YTGSDLKNLCTTA 736
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D AI+R R ++ I + LP ++RE ILR L K + +++D +A +T+G
Sbjct: 661 ATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEG 718
Query: 566 FSGADLTEICQRA 528
++G+DL +C A
Sbjct: 719 YTGSDLKNLCTTA 731
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + IY+ LPD ++R IL+ L + D +AK T+G
Sbjct: 497 ATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEG 554
Query: 566 FSGADLTEIC 537
+SG+DL +C
Sbjct: 555 YSGSDLKNLC 564
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D AI+R R ++ I + LP +SRE ILR L K +++D +A++T G
Sbjct: 559 ATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILRTLLSKEK-TENLDFQELAQMTDG 615
Query: 566 FSGADLTEICQRA 528
+SG+DL C A
Sbjct: 616 YSGSDLKNFCTTA 628
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D A++R RL + IY+ LPD ++R IL+ L + + +AK T+G
Sbjct: 296 ATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEG 353
Query: 566 FSGADLTEIC 537
+SG+DL +C
Sbjct: 354 YSGSDLKNLC 363
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATNRP +D AILR R Q I +PD + R IL+ L+ + D++ IA++ +
Sbjct: 232 ATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCED 289
Query: 566 FSGADLTEICQRA 528
++G+D+ E+C++A
Sbjct: 290 YTGSDIFELCKKA 302
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQ 570
ATN P +D AI R R D+ IYIPLP+ K+R+ + + +L +P + D Y+ + T+
Sbjct: 275 ATNTPYALDQAIRR--RFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTE 332
Query: 569 GFSGADLTEIC 537
GFSG+D++ +C
Sbjct: 333 GFSGSDVS-VC 342
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPI--AKDVDLSYIAKVT 573
ATNRP +D A R RL + +YIPLP ++R I++ L+K + D D++ I +T
Sbjct: 153 ATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLT 210
Query: 572 QGFSGADLTEICQRA 528
+G+SG+D+ + + A
Sbjct: 211 EGYSGSDMKNLVKDA 225
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 47.6 bits (108), Expect = 9e-06
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR--KSPIAKDVDLSYIAKVT 573
ATNR D ID A+ RPGR D+ LP ++R IL + R K P +++ +A
Sbjct: 528 ATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELK-EELAATC 586
Query: 572 QGFSGADLTEICQRA 528
G+ GADL +C A
Sbjct: 587 VGYCGADLKALCTEA 601
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/73 (31%), Positives = 43/73 (58%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN P +D A+LR RL++ I +PLPD ++R + + P + + + + ++G
Sbjct: 257 ATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEG 314
Query: 566 FSGADLTEICQRA 528
+SG+D+ +C+ A
Sbjct: 315 YSGSDIRILCKEA 327
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/73 (31%), Positives = 43/73 (58%)
Frame = -1
Query: 746 ATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQG 567
ATN P +D A+LR RL++ I +PLPD ++R + + P + + + + ++G
Sbjct: 248 ATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEG 305
Query: 566 FSGADLTEICQRA 528
+SG+D+ +C+ A
Sbjct: 306 YSGSDIRILCKEA 318
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 36.3 bits (80), Expect(2) = 0.005
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKD 603
+ATNRP +D A+ R+D++I PLP E+ R +L+ L K + D
Sbjct: 491 LATNRPGDLDSAVT--DRIDEVIEFPLPGEEERFKLLKLYLNKYLMGDD 537
Score = 21.0 bits (42), Expect(2) = 0.005
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 584 AKVTQGFSGADLTEI 540
AK T+GFSG ++ ++
Sbjct: 575 AKKTEGFSGREIAKL 589
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -1
Query: 725 IDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 570
ID A+ RPGR+D++ ++ P E RE IL ++ + VDL KV++
Sbjct: 576 IDEALRRPGRMDRVFHLQSPTEMERERILHNAAEETMDRELVDLVDWRKVSE 627
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
TN D +DPA+LRPGR+D IY+
Sbjct: 365 TNHKDRLDPALLRPGRMDMHIYM 387
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 31.5 bits (68), Expect(2) = 0.045
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK 621
+ATNR +D A+ R+D++I PLP E+ R +L L K
Sbjct: 476 LATNRRGDLDSAVT--DRIDEVIEFPLPGEEERFKLLNLYLNK 516
Score = 22.6 bits (46), Expect(2) = 0.045
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 605 DVDLSYIAKVTQGFSGADLTEI 540
D +S AK T+GFSG ++ ++
Sbjct: 550 DKVISEAAKKTEGFSGREIAKL 571
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
TN + +DPA+LRPGR+D IY+
Sbjct: 360 TNNKEKLDPALLRPGRMDMHIYM 382
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK 621
+ATNRP +D A+ R+D+++ PLP E+ R +L L K
Sbjct: 503 LATNRPGDLDSAVA--DRVDEVLEFPLPGEEERFKLLNLYLEK 543
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
TN +++DPA+LRPG +D IY+
Sbjct: 332 TNNKEVLDPALLRPGCMDMHIYL 354
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 749 VATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRK 621
+ATNRP +D A+ R+D+ + PLP E+ R +L L K
Sbjct: 504 LATNRPGDLDSAVA--DRIDETLEFPLPGEEERFKLLNLYLEK 544
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1
Query: 725 IDPAILRPGRLDQLIYIPLPD 663
IDPA+LRPGR+D I+ PL D
Sbjct: 335 IDPAMLRPGRVDVHIHFPLCD 355
>At5g64750.1 68418.m08142 AP2 domain-containing transcription
factor, putative contains similarity to transcription
factor
Length = 391
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -2
Query: 430 RPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNAGATGGTV 251
RP S H + M+ S S+ R+ + F Q QQS FP G TGG++
Sbjct: 281 RPASNQS-VHSQPLMQSYNLSYSEM-ARQQQQFQQHHQQSLDLYDQMSFPLRFGHTGGSM 338
Query: 250 LQRATSPRSRRR 215
+Q +S S R
Sbjct: 339 MQSTSSSSSHSR 350
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILR 636
TN + +DPA+LR GR+D IY+ + S + +L+
Sbjct: 371 TNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLK 406
>At4g27340.1 68417.m03923 Met-10+ like family protein ; contains
Pfam profile PF02475: Met-10+ like-protein
Length = 619
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 269 SRVCWESEVGSEAAALLQGLREHLVLADVVVGHG 370
+RV W S++G+E LL G ++ V+ DV G G
Sbjct: 422 ARVYWNSKLGTERQRLLLGFDQNDVVCDVFAGVG 455
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
TN + +DPA+LRPGR+D I++
Sbjct: 356 TNYREKLDPALLRPGRMDMHIHM 378
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLI 681
TN + +DPA+LRPGR+D I
Sbjct: 356 TNHKERLDPALLRPGRMDMHI 376
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLR-KSPIAKDVDLSYIAKVTQ- 570
TN + +DPA+LR GR+D I++ S + +LR L + DV L +A+V
Sbjct: 362 TNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDVVLKELAEVVDR 421
Query: 569 -GFSGADLTE 543
+ AD++E
Sbjct: 422 AEITPADVSE 431
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLD 690
TN + +DPA+LRPGR+D
Sbjct: 150 TNHKEKLDPALLRPGRMD 167
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLD 690
TN + +DPA+LRPGR+D
Sbjct: 352 TNHKERLDPALLRPGRMD 369
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLD 690
TN + +DPA+LRPGR+D
Sbjct: 362 TNHKEKLDPALLRPGRMD 379
>At5g39020.1 68418.m04722 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 813
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 522 LAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTA 701
+A L YL T + D++ N+L D F A GLA L ++ + L+ T
Sbjct: 600 IARGLEYLHYGCKTRIVHF--DIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTR 657
Query: 702 GT 707
GT
Sbjct: 658 GT 659
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
T + +DPA+LRPGR+D I++
Sbjct: 355 TTHKERLDPALLRPGRMDMHIHM 377
>At4g36910.1 68417.m05232 CBS domain-containing protein contains
Pfam profile PF00571: CBS domain
Length = 236
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 313 SRGFGTNFRFPTNAGATGGTVLQRATSPRS 224
SR F + R P+ + A G T++ ++SPRS
Sbjct: 43 SRSFPSKSRIPSASSAAGSTLMTNSSSPRS 72
>At3g52080.1 68416.m05715 cation/hydrogen exchanger, putative
(CHX28) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 732
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 95 VVGRHAGQTDRTLVHGLSRWWRCPEV 172
+VGR G+ L GL+ W +CPE+
Sbjct: 667 IVGRGGGRASSGLTTGLNDWQQCPEL 692
>At2g37340.3 68415.m04580 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 249
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -1
Query: 434 RKTRSGD*PRSLRGGDEVRAPLRVRQRHPQVRD---VRADPAAEPRLRNQLQIPNKRGSY 264
R++ S RS R R+P+R R+R + R R D + PR R++ + + GS
Sbjct: 121 RRSPSRSLSRS-RSYSRSRSPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVLDDEGSP 179
Query: 263 RGHGTSAGDQPTFQEEGGDD 204
+ S P Q+E G D
Sbjct: 180 KIIDGSPPPSPKLQKEVGSD 199
>At2g37340.2 68415.m04579 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 260
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -1
Query: 434 RKTRSGD*PRSLRGGDEVRAPLRVRQRHPQVRD---VRADPAAEPRLRNQLQIPNKRGSY 264
R++ S RS R R+P+R R+R + R R D + PR R++ + + GS
Sbjct: 132 RRSPSRSLSRS-RSYSRSRSPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVLDDEGSP 190
Query: 263 RGHGTSAGDQPTFQEEGGDD 204
+ S P Q+E G D
Sbjct: 191 KIIDGSPPPSPKLQKEVGSD 210
>At2g37340.1 68415.m04581 splicing factor RSZ33 (RSZ33) nearly
identical to splicing factor RSZ33 [Arabidopsis
thaliana] GI:9843663; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00098: Zinc knuckle
Length = 290
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -1
Query: 434 RKTRSGD*PRSLRGGDEVRAPLRVRQRHPQVRD---VRADPAAEPRLRNQLQIPNKRGSY 264
R++ S RS R R+P+R R+R + R R D + PR R++ + + GS
Sbjct: 162 RRSPSRSLSRS-RSYSRSRSPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVLDDEGSP 220
Query: 263 RGHGTSAGDQPTFQEEGGDD 204
+ S P Q+E G D
Sbjct: 221 KIIDGSPPPSPKLQKEVGSD 240
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 519 QLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRF-AKVGAQDGLAGLLVRQRDVDELVQ 695
++AG+LAYL ++T DV+ N+L D ++ AKV + V Q + LV
Sbjct: 489 EIAGALAYLHSAASTPVYHR--DVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLV- 545
Query: 696 TAGT 707
AGT
Sbjct: 546 -AGT 548
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 519 QLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRF-AKVGAQDGLAGLLVRQRDVDELVQ 695
++AG+LAYL ++T DV+ N+L D ++ AKV + V Q + LV
Sbjct: 526 EIAGALAYLHSAASTPVYHR--DVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLV- 582
Query: 696 TAGT 707
AGT
Sbjct: 583 -AGT 585
>At5g53890.1 68418.m06703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1036
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +3
Query: 525 AGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAG 704
A LAYL +V + DV+ N+L D +F A GLA LL R D G
Sbjct: 862 ARGLAYLHKVCEPNVIHR--DVKSSNILLDEKFEAHLADFGLARLL-RPYDTHVTTDLVG 918
Query: 705 T 707
T
Sbjct: 919 T 919
>At2g13800.1 68415.m01523 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 601
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 486 DGSPPR-WPANGQLA-GS---LAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGL 650
+G+P WP +A GS LAYL + + HL DV+ N+L D F V GL
Sbjct: 366 EGNPALDWPKRKHIALGSARGLAYLHD-HCDQKIIHL-DVKAANILLDEEFEAVVGDFGL 423
Query: 651 AGLL 662
A L+
Sbjct: 424 AKLM 427
>At1g17540.1 68414.m02157 protein kinase-related similar to
serine/threonine protein kinase Fen [Lycopersicon
esculentum] GI:1809259
Length = 733
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +3
Query: 483 RDGSPP-RWPANGQLAGSLA----YLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDG 647
+D +PP W A ++A +A +L Q E L H D++ N+L DR F + G
Sbjct: 506 KDNTPPLSWRARFRIAAEIATGLLFLHQAKP-EPLVHR-DLKPANILIDRHFTSKISDVG 563
Query: 648 LAGLL 662
LA L+
Sbjct: 564 LARLV 568
>At5g38250.1 68418.m04611 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 579
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 522 LAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTA 701
+A L YL T + D++ NVL D A GLA L +Q + L+ T
Sbjct: 371 VARGLEYLHYGCKTRIVHF--DIKPQNVLLDENLRPKVADFGLAKLCEKQESILSLLDTR 428
Query: 702 GT 707
GT
Sbjct: 429 GT 430
>At5g20050.1 68418.m02387 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 452
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 522 LAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVR 668
+A +LAYL ++ L HL DV+ N+L D F V GL+ L+ R
Sbjct: 217 VAKALAYLHHDCRSKIL-HL-DVKPENILLDENFRAVVTDFGLSKLIAR 263
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 525 AGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQ 671
A L Y+ T A+ H DV+ N+L D F A GLA LL++Q
Sbjct: 801 AQGLCYMHH-DCTPAIIHR-DVKSSNILLDSEFNAKIADFGLAKLLIKQ 847
>At4g05340.1 68417.m00816 hypothetical protein
Length = 96
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLD 690
TN + +DPA LRPG++D
Sbjct: 53 TNHKEKLDPAFLRPGKMD 70
>At4g03230.1 68417.m00442 S-locus lectin protein kinase family
protein contains Pfam domins, PF00069: Protein kinase
domain, PF00954: S-locus glycoprotein family and
PF01453: Lectin (probable mannose binding)
Length = 852
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 128 SCLFVLRVAPPHQHGAWPRPVHVCDSDADIGRVVLNIRRRRD 3
S +F+ R + G+ PR VH+CDS+ I ++ + R ++D
Sbjct: 469 SYVFLQRRKVNKELGSIPRGVHLCDSERHIKELIESGRFKQD 510
>At1g33970.1 68414.m04212 avirulence-responsive protein, putative /
avirulence induced gene protein, putative / AIG protein,
putative similar to SP|P54120 AIG1 protein {Arabidopsis
thaliana}; contains Pfam profile PF04548: AIG1 family
Length = 342
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 334 FAQTLQQSRGFGTNFRFPTNAGATGGTVLQR-ATSPRSRRRGVTTTCTSKLCLARD 170
FA + R R ATG ++L R A R+R GVT+TC S+ + D
Sbjct: 17 FASSSNPKRTLVLVGRTGNGKSATGNSILGRKAFRSRARTVGVTSTCESQRVVQED 72
>At5g38240.1 68418.m04610 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 588
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 585 DVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 707
D++ NVL D A GLA L +Q + L+ T GT
Sbjct: 398 DIKPQNVLLDENLKPKVADFGLAKLCEKQESILSLLDTRGT 438
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 743 TNRPDIIDPAILRPGRLDQLIYI 675
TN + +D A+LRPGR+D I++
Sbjct: 414 TNYKEKLDAALLRPGRMDMHIHM 436
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 726 HRPGH--PASRPSGPAHLHPAAGREVPRGHPARQPSQIAYR*GR 601
H P H P+S+P H P P HP+ QP ++ R GR
Sbjct: 88 HPPLHSLPSSKPEVKPHPRPTGNPICPVSHPS-QPHTLSLRSGR 130
>At2g42030.1 68415.m05198 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 425
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 467 CWRLLSRWISASMAGEWPACR 529
CW L +W+ S A E P C+
Sbjct: 161 CWSCLYQWLQVSEAKECPVCK 181
>At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family
protein
Length = 523
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 490 PSREESPAASRRCRYGHGRGRPV 422
P RE S A YGHGRGRP+
Sbjct: 72 PGREPSSAGG----YGHGRGRPI 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,043,347
Number of Sequences: 28952
Number of extensions: 384653
Number of successful extensions: 1326
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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