Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021141
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1371 - 26100553-26101767 132 4e-31
08_02_0774 - 21047696-21048889 125 4e-29
01_06_1220 + 35493575-35494765 124 7e-29
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 124 1e-28
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 121 7e-28
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 118 6e-27
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 116 2e-26
02_01_0042 + 295608-296222,298479-298925 49 4e-06
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 35 0.077
09_04_0719 + 19716536-19716857,19716949-19717101,19717493-197177... 32 0.54
04_04_0587 + 26410808-26411338 31 1.2
12_02_0696 - 22227255-22227488 30 2.2
10_06_0120 - 10979458-10979665,10979909-10980585,10981315-109815... 29 2.9
05_04_0057 + 17543016-17543312 29 2.9
05_03_0485 + 14608663-14608989,14609265-14609535,14609720-146098... 29 2.9
10_03_0046 + 7357777-7357992 29 3.8
07_03_0730 + 21030123-21030338 29 3.8
01_06_1064 + 34237919-34238155 29 3.8
08_02_1015 - 23597445-23597628,23597654-23597877 29 5.0
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 29 5.0
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 6.6
01_05_0225 - 19501643-19501903,19503974-19504477 28 6.6
12_01_0576 + 4705912-4706220,4706319-4706393,4707398-4707477,470... 28 8.8
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 28 8.8
04_04_1351 - 32827136-32827984 28 8.8
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858 28 8.8
>07_03_1371 - 26100553-26101767
Length = 404
Score = 132 bits (318), Expect = 4e-31
Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Frame = +3
Query: 252 SDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIA 431
+DL H NTPAKV+G G EEL+ + DVVVIPAGVPRKPGMTRDDLF NA IVR++
Sbjct: 119 ADLGHCNTPAKVAGFTGKEELAGCLAGVDVVVIPAGVPRKPGMTRDDLFGINAGIVRELV 178
Query: 432 LSIAQNAPKAIVAIITNPVNSTVPIALKCSRRREC-TTRTACSASPLWTYRAATFVGEIN 608
++A +AP A+V +I+NPVNSTVPIA + +R+ R + L RA TFV E+
Sbjct: 179 EAVADHAPAALVHVISNPVNSTVPIAAEVLKRKGVYDPRKLFGVTTLDVVRANTFVAEMK 238
Query: 609 GV 614
G+
Sbjct: 239 GL 240
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCHLRRRDQWRGPNS-VAVPVIGGHSGITIIPILSQ 685
+EVLK+ GVYDP ++ GVTTLDV R + + P + V VPV+GGH+ TI+P+LS+
Sbjct: 205 AEVLKRKGVYDPRKLFGVTTLDVVRANTFVAEMKGLPLADVDVPVVGGHAAATILPLLSK 264
Query: 686 CQPALKLSD 712
+P +D
Sbjct: 265 ARPKTAFTD 273
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 160 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAA 255
IGQPL+LL+K +PLV+ L LYDIA V GV A
Sbjct: 89 IGQPLSLLVKMSPLVSALHLYDIANV-DGVTA 119
>08_02_0774 - 21047696-21048889
Length = 397
Score = 125 bits (301), Expect = 4e-29
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Frame = +3
Query: 252 SDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIA 431
+DLSH NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASIV+ +
Sbjct: 117 ADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLV 176
Query: 432 LSIAQNAPKAIVAIITNPVNSTVPIALKCSRRREC-TTRTACSASPLWTYRAATFVGE 602
++A N P+A + II+NPVNSTVPIA + +++ + + L RA TFV +
Sbjct: 177 EAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQ 234
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/70 (45%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCH--LRRRDQWRGPNSVAVPVIGGHSGITIIPILS 682
+EVLK+ GVY+P ++ GVTTLDV R + + ++ + + V VPV+GGH+GITI+P+LS
Sbjct: 203 AEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLID-VDVPVVGGHAGITILPLLS 261
Query: 683 QCQPALKLSD 712
+ P++ +D
Sbjct: 262 KTMPSVTFTD 271
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 94 AKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAA 255
AK+ S S + ++K IGQPL LL+K +PLV+ L LYDIA V GVAA
Sbjct: 64 AKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANV-KGVAA 117
>01_06_1220 + 35493575-35494765
Length = 396
Score = 124 bits (299), Expect = 7e-29
Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Frame = +3
Query: 252 SDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIA 431
+DLSH NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASIV+ +
Sbjct: 117 ADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKTLV 176
Query: 432 LSIAQNAPKAIVAIITNPVNSTVPIALKCSRRREC-TTRTACSASPLWTYRAATFVGE 602
++A N P+A + II+NPVNSTVPIA + +++ + + L RA TF+ +
Sbjct: 177 EAVADNCPEAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFIAQ 234
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/70 (44%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCH--LRRRDQWRGPNSVAVPVIGGHSGITIIPILS 682
+EVLK+ GVY+P ++ GVTTLDV R + + ++ + + V VPV+GGH+GITI+P+LS
Sbjct: 203 AEVLKQKGVYNPKKLFGVTTLDVVRANTFIAQKKNLKLID-VDVPVVGGHAGITILPLLS 261
Query: 683 QCQPALKLSD 712
+ +P++ ++
Sbjct: 262 KTRPSVTFTN 271
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +1
Query: 58 ALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPV 237
++ P + N + S + ++K IGQPL LL+K +PLV+ L LYDIA V
Sbjct: 55 SISPRIVPKANSGSHISP--EASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIANV 112
Query: 238 TPGVAA 255
GVAA
Sbjct: 113 -KGVAA 117
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 124 bits (298), Expect = 1e-28
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Frame = +3
Query: 240 PRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIV 419
P +D+SHM+T A V G GP +L AA+ D+V+IPAG+PRKPGMTRDDLFN NA IV
Sbjct: 80 PGVTADVSHMDTTAVVRGFLGPNQLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIV 139
Query: 420 RDIALSIAQNAPKAIVAIITNPVNSTVPIALKCSRRR-ECTTRTACSASPLWTYRAATFV 596
R + +A+ P AIV +I+NPVNSTVPIA + ++ + + L RA TFV
Sbjct: 140 RSLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVARANTFV 199
Query: 597 GEINGVD 617
E+ G+D
Sbjct: 200 AEVLGID 206
Score = 73.7 bits (173), Expect = 1e-13
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCHLRRRDQWR-GPNSVAVPVIGGHSGITIIPILSQ 685
+EV KKAG YDP R+LGVTTLDV+R + + P V VPV+GGH+G+TI+P+LSQ
Sbjct: 170 AEVFKKAGTYDPKRLLGVTTLDVARANTFVAEVLGIDPKDVNVPVVGGHAGVTILPLLSQ 229
Query: 686 CQP 694
P
Sbjct: 230 VHP 232
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +1
Query: 127 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAA 255
FK IGQPL+LL+K NPLV+ L LYD+ TPGV A
Sbjct: 43 FKVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVN-TPGVTA 84
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 121 bits (291), Expect = 7e-28
Identities = 64/127 (50%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +3
Query: 240 PRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIV 419
P +D+SHMNT A V G G +L A+ D+V+IPAGVPRKPGMTRDDLFN NA IV
Sbjct: 95 PGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 154
Query: 420 RDIALSIAQNAPKAIVAIITNPVNSTVPIALKCSRRR-ECTTRTACSASPLWTYRAATFV 596
R + IA+ P AIV +I+NPVNSTVPIA + ++ + + L RA TFV
Sbjct: 155 RTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFV 214
Query: 597 GEINGVD 617
E+ G+D
Sbjct: 215 AEVLGLD 221
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCHLRRRDQWR-GPNSVAVPVIGGHSGITIIPILSQ 685
+EV KKAG YDP R+LGVTTLDV R + + P V VPVIGGH+G+TI+P+LSQ
Sbjct: 185 AEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQ 244
Query: 686 CQP 694
P
Sbjct: 245 VNP 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +1
Query: 127 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAA 255
FK IGQPLALL+K NPLV+ L LYD+ TPGV A
Sbjct: 58 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVN-TPGVTA 99
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 118 bits (283), Expect = 6e-27
Identities = 52/96 (54%), Positives = 74/96 (77%)
Frame = +3
Query: 240 PRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIV 419
P +D+SH+N PA+V G G ++L A++ +D+V+IPAGVPRKPGMTRDDLFN NA IV
Sbjct: 65 PGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIV 124
Query: 420 RDIALSIAQNAPKAIVAIITNPVNSTVPIALKCSRR 527
+++ +IA+ P A+V +I+NPVNSTVPIA + ++
Sbjct: 125 KNLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKK 160
Score = 66.9 bits (156), Expect = 2e-11
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCHLRRRDQWRGP-NSVAVPVIGGHSGITIIPILSQ 685
+EV KKAG YD ++ GVTTLDV R + P V VPV+GGH+GITI+P+ SQ
Sbjct: 155 AEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGITILPLFSQ 214
Query: 686 CQPALK-LSD 712
PA LSD
Sbjct: 215 ATPATNALSD 224
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 ALKPAALAVQNGAKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP 234
+L +A V + +S+ S Q K IGQPL+LL+K NPLV+ L+LYDIA
Sbjct: 4 SLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAG 63
Query: 235 VTPGVAA 255
TPGVAA
Sbjct: 64 -TPGVAA 69
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 116 bits (279), Expect = 2e-26
Identities = 53/96 (55%), Positives = 73/96 (76%)
Frame = +3
Query: 240 PRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIV 419
P +D+SH+N+PA V G G E+L A++ +DVV+IPAGVPRKPGMTRDDLFN NA IV
Sbjct: 64 PGVAADVSHINSPALVKGFVGEEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIV 123
Query: 420 RDIALSIAQNAPKAIVAIITNPVNSTVPIALKCSRR 527
+ + +I++ P A+V +I+NPVNSTVPIA + ++
Sbjct: 124 KGLCTAISKYCPNALVNMISNPVNSTVPIAAEVFKK 159
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 SEVLKKAGVYDPNRVLGVTTLDVSRCHLRRRDQWRGP-NSVAVPVIGGHSGITIIPILSQ 685
+EV KKAG YD ++ GVTTLDV R + P V VPV+GGH+GITI+P+ SQ
Sbjct: 154 AEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGITILPLFSQ 213
Query: 686 CQPA 697
PA
Sbjct: 214 ATPA 217
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 160 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAA 255
IGQPLALL+K NPLV+ L+LYDIA TPGVAA
Sbjct: 38 IGQPLALLMKLNPLVSSLSLYDIAG-TPGVAA 68
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/68 (30%), Positives = 43/68 (63%)
Frame = +3
Query: 318 AAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPVNST 497
A + +D+ ++ AG + PG +R +L N ++ R I ++A+++P+A++ I++NPV+
Sbjct: 103 AVTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEALLLIVSNPVDVL 162
Query: 498 VPIALKCS 521
+A K S
Sbjct: 163 TYVAWKLS 170
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 KDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAI-VAIITNPVNSTVP 503
+DA+ ++ PR PGM R L + N I + ++ A + + V ++ NP N+
Sbjct: 148 EDAEWALLIGAKPRGPGMERSALLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNAL 207
Query: 504 IALK 515
I LK
Sbjct: 208 ICLK 211
>09_04_0719 +
19716536-19716857,19716949-19717101,19717493-19717707,
19717785-19717855,19717998-19718157,19718598-19718790,
19718936-19719091,19719229-19719317,19719602-19719695,
19719870-19720039
Length = 540
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 165 PAFGPSTEAESSGDQAGFIRHSACDPRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVV 344
P+ PS+ + S + +R S DP RR + P + PE A+ DVV
Sbjct: 12 PSHAPSSSSSLSASYSRVLRFSVRDPWRRRRGQRL--PLHALRSQRPEPAPASASHHDVV 69
Query: 345 VIPAGV 362
V+ AG+
Sbjct: 70 VVGAGI 75
>04_04_0587 + 26410808-26411338
Length = 176
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 226 CRIKPAWSPEDSASVEGPKAGRYHRRHQRP 137
CR KPA SP A++ P GR RR +RP
Sbjct: 3 CRAKPASSPPSRAALAAP--GRCRRRRRRP 30
>12_02_0696 - 22227255-22227488
Length = 77
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 210 AGFIRHSACDPRRRSDLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVP 365
AG +R +AC + +S + + + + DAD+VV+PAG P
Sbjct: 2 AGVVRSAACSGGEGERKTSWPEVVGLSAEEAKKVILKDMPDADIVVLPAGSP 53
>10_06_0120 -
10979458-10979665,10979909-10980585,10981315-10981538,
10981763-10982136,10982203-10982786
Length = 688
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 281 QGQRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 382
Q +RPQGT A+ SH C CS+ S GND
Sbjct: 268 QEKRPQGTVKALDSHVTCEVCSNTGHS----GND 297
>05_04_0057 + 17543016-17543312
Length = 98
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 65 NLPPLLYKMVQRTFPPHHRGTLKWWSLVP 151
++P L+ V R PP RG +WW L P
Sbjct: 39 SVPSLVEVEVDRCGPPGRRGGRRWWLLCP 67
>05_03_0485 +
14608663-14608989,14609265-14609535,14609720-14609830,
14609870-14610423
Length = 420
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 287 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 382
+RPQGT A+ SH C C H S GND
Sbjct: 137 KRPQGTVQALDSHVTCEVCDHTGHS----GND 164
>10_03_0046 + 7357777-7357992
Length = 71
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 135 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 218
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>07_03_0730 + 21030123-21030338
Length = 71
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 135 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 218
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>01_06_1064 + 34237919-34238155
Length = 78
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 135 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 218
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>08_02_1015 - 23597445-23597628,23597654-23597877
Length = 135
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 211 AWSPEDSASVEGPKAGRYHRRHQRPPL*SSSVMW 110
AW+ ED+A + + G + RPP SS V W
Sbjct: 2 AWTVEDAAISDELRRGAWMTERTRPPPLSSDVAW 35
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 261 SHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRK-PGMTRDDLFNTNASIVRDIALS 437
+H N P KV +GP A K+ VV G RK P +R+ +AS VR+ +
Sbjct: 264 NHQNRPQKVVRGRGPRRYEAVAKNNRDVV---GFQRKQPARSRESA--ASASAVRESGQT 318
Query: 438 IAQNAPKAIVAIITNPVNSTV 500
+ NA + N VNS++
Sbjct: 319 L--NAQSEMAPPKKNVVNSSL 337
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 287 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 382
+RPQGT A+ SH C CS ST +GND
Sbjct: 152 KRPQGTVKALDSHVTCEVCS----STGHSGND 179
>01_05_0225 - 19501643-19501903,19503974-19504477
Length = 254
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 190 QNPLVTRLALYDIAPVTPGVAATFPT*TPQPRSAATRDLRSYQQPSKML 336
+ P +R Y +APV +T P P P+ ++ D R+ S +L
Sbjct: 113 EQPAASRSPCYSLAPVGGVAYSTIPIQQPPPQDGSSSDHRAATAASPLL 161
>12_01_0576 +
4705912-4706220,4706319-4706393,4707398-4707477,
4707578-4707712,4708131-4708195,4708292-4708419,
4709108-4709364,4709457-4709982
Length = 524
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 541 PEPRARRHHSGRIALPPSSARSMAW 615
P PRARR++ R+A S+AR M W
Sbjct: 34 PPPRARRYN--RLAASASAAREMPW 56
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 287 QRPQGT*GAISSHQRC*CCSHPSRS 361
+RPQGT A+ SH C C + S S
Sbjct: 198 KRPQGTVKALDSHVTCEVCGNTSHS 222
>04_04_1351 - 32827136-32827984
Length = 282
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 526 GGSVRPEPRARRHHSGRIALPPS 594
GG P P + H GR A PPS
Sbjct: 165 GGGYSPSPSPPKRHGGRKACPPS 187
>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
Length = 275
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 223 RIKPAWSPEDSASVEGPKAGRYHRRHQR 140
R+ PAW+PE+ A +E G Y RH R
Sbjct: 109 RLSPAWTPEEDACLERLARG-YGFRHWR 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,875,925
Number of Sequences: 37544
Number of extensions: 537317
Number of successful extensions: 1838
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1829
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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