Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021140X
         (490 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10910-1|CAA71851.1|  344|Drosophila melanogaster motor protein ...    28   6.0  
M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein ( D.me...    28   6.0  
M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor ...    28   6.0  
BT025806-1|ABF85706.1|  620|Drosophila melanogaster IP01548p pro...    28   6.0  
AF145623-1|AAD38598.1|  739|Drosophila melanogaster motor-protei...    28   6.0  
AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA...    28   6.0  
AE014297-3079|AAF55943.2|  841|Drosophila melanogaster CG6455-PA...    28   6.0  

>Y10910-1|CAA71851.1|  344|Drosophila melanogaster motor protein
           protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 409 SKPAE-KKTESAPTXKPGSAKAAALKAK 489
           SKP+E  KTE+ P  KP +A A A  AK
Sbjct: 121 SKPSEVSKTEAKPVSKPAAAAAPAPAAK 148


>M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein (
            D.melanogaster trp proteingene, complete cds. ).
          Length = 1275

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 403  TTSKPAE--KKTESAPTXKPGSAKAAALK 483
            T SKP E  KK   AP  KPG  K AA K
Sbjct: 1049 TISKPGESQKKDAPAPPTKPGDTKPAAPK 1077


>M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor
            membrane-associatedprotein protein.
          Length = 1274

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 403  TTSKPAE--KKTESAPTXKPGSAKAAALK 483
            T SKP E  KK   AP  KPG  K AA K
Sbjct: 1048 TISKPGESQKKDAPAPPTKPGDTKPAAPK 1076


>BT025806-1|ABF85706.1|  620|Drosophila melanogaster IP01548p
           protein.
          Length = 620

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 403 TTSKPAE--KKTESAPTXKPGSAKAAALK 483
           T SKP E  KK   AP  KPG  K AA K
Sbjct: 394 TISKPGESQKKDAPAPPTKPGDTKPAAPK 422


>AF145623-1|AAD38598.1|  739|Drosophila melanogaster motor-protein
           protein.
          Length = 739

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 409 SKPAE-KKTESAPTXKPGSAKAAALKAK 489
           SKP+E  KTE+ P  KP +A A A  AK
Sbjct: 186 SKPSEVSKTEAKPVSKPAAAAAPAPAAK 213


>AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA
            protein.
          Length = 1275

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 403  TTSKPAE--KKTESAPTXKPGSAKAAALK 483
            T SKP E  KK   AP  KPG  K AA K
Sbjct: 1049 TISKPGESQKKDAPAPPTKPGDTKPAAPK 1077


>AE014297-3079|AAF55943.2|  841|Drosophila melanogaster CG6455-PA,
           isoform A protein.
          Length = 841

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 409 SKPAE-KKTESAPTXKPGSAKAAALKAK 489
           SKP+E  KTE+ P  KP +A A A  AK
Sbjct: 288 SKPSEVSKTEAKPVSKPAAAAAPAPAAK 315


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.295    0.107    0.283 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,880,439
Number of Sequences: 53049
Number of extensions: 26018
Number of successful extensions: 91
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (22.0 bits)