Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021139
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   1.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -3

Query: 240 VNKLLLRRFVRFTTKCYVKREHLFYLFKIRISV*FFY--VIHGQSAKLMMTCVYIYIYEL 67
           V+ L    F+ FT    +   + +Y F I + V +FY   I      L + C+Y ++  L
Sbjct: 81  VHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPL 140


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 770 CCKKKSMRTLPITI*HCF 717
           CC++  +R   IT+ HC+
Sbjct: 83  CCRESFLRERTITLTHCY 100


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 359 NHKLRVVKNSNNFKNYIHP 415
           N+   V+ N   + NY HP
Sbjct: 69  NYNSNVLSNGYGYGNYYHP 87


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 359 NHKLRVVKNSNNFKNYIHP 415
           N+   V+ N   + NY HP
Sbjct: 69  NYNSNVLSNGYGYGNYYHP 87


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 773 NCCKKKSMR 747
           NCC KKS R
Sbjct: 106 NCCSKKSFR 114


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 572 LIDFFNNYLAFTSYYVFLWTV*DLVFFIF*LHKYD*LKILRDQL 441
           ++ FF + +A       L    DL F I+ +H YD  K +++++
Sbjct: 254 VVQFFCSLVALCLTMYKLSLTEDLYFAIYEMHWYDASKQIQNEV 297


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 359 NHKLRVVKNSNNFKNYIHP 415
           N+   V+ N   + NY HP
Sbjct: 69  NYNSNVLSNGYGYGNYYHP 87


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 359 NHKLRVVKNSNNFKNYIHP 415
           N+   V+ N   + NY HP
Sbjct: 69  NYNSNVLSNGYGYGNYYHP 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,657
Number of Sequences: 336
Number of extensions: 3850
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)