Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021138
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4013| Best HMM Match : Spindle_assoc (HMM E-Value=4.7e-15) 72 5e-13
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 35 0.066
SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 31 1.1
SB_2340| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 30 2.5
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_44208| Best HMM Match : DHHA2 (HMM E-Value=8.3) 29 3.3
SB_45286| Best HMM Match : GRIP (HMM E-Value=3.6e-08) 29 4.3
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 29 4.3
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 29 5.7
SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10) 29 5.7
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 5.7
SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 7.6
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 7.6
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 7.6
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 25 7.6
>SB_4013| Best HMM Match : Spindle_assoc (HMM E-Value=4.7e-15)
Length = 134
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/70 (50%), Positives = 50/70 (71%)
Frame = +3
Query: 258 SMKQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQIT 437
+MK YE Q++ L+KENF LKLRIYFLEE+L N P L + N+ L+V VE+ ++++
Sbjct: 67 TMKDYEFQISELKKENFGLKLRIYFLEERLANDDTP--DDLFKANIELKVTVEKQKKELV 124
Query: 438 DKQELLAAAA 467
+KQELL A+
Sbjct: 125 EKQELLVKAS 134
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 35.1 bits (77), Expect = 0.066
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +3
Query: 180 RYKSSEVARNGDAVN*RSRCYKYQWISMK----QYEEQLNGLRKENFHLKLRIYFLEEKL 347
R K EV + D +R Y + +K + EQ+ L++EN L + L ++L
Sbjct: 1493 RVKLEEVQADLDNSQKEARNYSTEMYKIKAAFDEQSEQVEALKRENKSLASEVNDLADQL 1552
Query: 348 GNGSPPAVQGLLEHNVRLQVEVEELRRQITDKQELL 455
G G V+ L + RL++E EEL+ + + + L
Sbjct: 1553 GEGGKSVVE-LEKLRKRLEMEKEELQTALEEAEGAL 1587
>SB_26006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 255 ISMKQYEEQLNGLRKENFHLKLRIYFLEEK 344
+S K E + L+KENF LKLR+Y +E+K
Sbjct: 117 MSFKDQETLIQELKKENFDLKLRLY-MEQK 145
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 521 VSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLAVTVNNEDLDELMKLRRE-N 697
VS NNS + + ++P + + D DD + S AV+ N D+D+ + E
Sbjct: 1043 VSANNSIGISRPSEPFEVVMLETD-TDDDVTPTSSPTHKSAVSWKN-DIDQYYNIYAELG 1100
Query: 698 RKALQMIKGCMKKNT 742
R ++K C++K+T
Sbjct: 1101 RGRYAVVKKCVEKST 1115
>SB_2340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 264 KQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLE 386
K E G R NF K + +++ + LGNG+P A +GL E
Sbjct: 25 KNCGEVHKGKRVINFEQK-KTWYMSDSLGNGTPTACRGLCE 64
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 333 LEEKLGN-GSPPAVQGLLEHNVRLQVEVEELRRQITDKQELLAAAAEAI 476
LE+ L + G V GL EH +RL+ E + Q+TDK+E + E +
Sbjct: 745 LEQDLASRGQHEDVYGLREHRIRLKEIDVEGKLQVTDKKEEVGRNVERL 793
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 267 QYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVR-LQVEVEELRRQITDK 443
+ +Q LR + L +EEK+ N S + LE VR L+ + EEL ++ +K
Sbjct: 1414 ELRQQQELLRDKESALAAASSKIEEKIANFSERETE--LESQVRALESQCEELEYRVKEK 1471
Query: 444 QELLAAAAEAIDVLEQQGSVSTTVWRC 524
+E L A E + E+ +++ +C
Sbjct: 1472 EESLLLANEKLS--EKDAEIASVEKKC 1496
>SB_43688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 497 FSLDD-SMEVSMNNSASMKKAADPH---DETTEKRDAVDDTCAESESAGDYLAVTVNNED 664
FS DD S E + ++ S+ +A + E ++ + ++TC + D + T NED
Sbjct: 427 FSSDDTSQEANGSSIPSINEAHQGNGLGSENSKFNELAENTCDGTSQNSDASSDTSKNED 486
Query: 665 LDELMKLRRENRKALQMIKG 724
L+ L ENR+ + KG
Sbjct: 487 LNMEDGLEIENREPKENTKG 506
>SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 506 DDSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLAVTVNNEDLDE 673
DD ++ S ++ + D HD+ + +D+ DD ++S D T +++D+D+
Sbjct: 72 DDDIDDSTDSHDDIDDGTDDHDDIDDGKDSHDDIDDGTDSHDDIDDGTDDHDDIDD 127
>SB_44208| Best HMM Match : DHHA2 (HMM E-Value=8.3)
Length = 289
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 506 DDSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLAVTVNNEDLDEL 676
D+ + + + + S K+A D DE++E V A E+ L VN + +DE+
Sbjct: 135 DEELNIEEDFADSDKEAEDSADESSESASVVTSGAAAMEALIAKLPTCVNKDMIDEV 191
>SB_45286| Best HMM Match : GRIP (HMM E-Value=3.6e-08)
Length = 800
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 264 KQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQ 431
+ YE ++ LRKE LK R+ EEK SP VQ LQ E+ E++R+
Sbjct: 291 RDYENCISQLRKELKELKERLEKAEEKSSKPSPLLVQ--------LQEEMAEMKRE 338
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 500 SLDDSMEVSMNNSASMKKAADP----HDETTEKRDAVDDTCAESESAGDYLAVTVNNEDL 667
++ S+ + NN + + AA+ H+ +E+ VDD+ + AG+ ++VT +
Sbjct: 180 AMHGSLAQNENNEITGESAAETTFCLHENVSEESTIVDDSTQIEQGAGNNVSVTQPGSQI 239
Query: 668 DE 673
DE
Sbjct: 240 DE 241
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +3
Query: 741 QQQDKEIRR--LNWIRNWH 791
QQ DK R LNW+RNWH
Sbjct: 231 QQGDKSNMRKLLNWVRNWH 249
>SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10)
Length = 517
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 509 DSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLAVTVNNEDLDELMKLR 688
D ++ S S K A + + ETT+ D +D S S G + VNN + D+ L+
Sbjct: 85 DPLKESHGAKGSPKLAKECNKETTDNDDNGNDGDDLSRSIGGKIDDDVNNINNDDKESLK 144
Query: 689 REN 697
R++
Sbjct: 145 RQS 147
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 342 KLGNGSPPAVQGLLEHNVRLQVEVEELRRQITDKQELLAAAAE 470
KL G QGL+ LQ EEL++Q+TD +E L E
Sbjct: 33 KLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEKLQMVME 75
>SB_23046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2708
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 506 DDSMEVSMNNSASMKKAADPHDETTEK 586
DD+ S N S+S + +D +ETTEK
Sbjct: 775 DDTQNTSANESSSSSEDSDSSEETTEK 801
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 261 MKQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQITD 440
+ + +E L+ K+ + L I L EKL G+ V EH+ Q E+E LR QI
Sbjct: 832 LDEIKEALSIKDKDIENYNLVIESLNEKLQQGTQDLVASN-EHSKSQQSEIESLRSQIES 890
Query: 441 KQELLAAAAEAIDVLEQQGSV 503
+ A + L+ Q V
Sbjct: 891 LNKFYNENQSAEEKLQGQREV 911
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 342 KLGNGSPPAVQGLLEHNVRLQVEVEELRRQITDKQELLAAAAE 470
KL G QGL +LQ EEL++Q+TD +E L E
Sbjct: 737 KLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEKLQMVME 779
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 255 ISMKQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPP---AVQGLLEHNVRLQVEVEEL- 422
+ + +YE Q+N + K+ LK ++ L E L + +LE+ L + EEL
Sbjct: 543 LKISKYEAQINNVTKQKNALKQQVDNLREDLKKSKEAQNLLQREVLENRKDLDLFREELS 602
Query: 423 -RRQITDKQELLAAAAE-AIDVLEQQ 494
+ Q DK E + A E +D L+Q+
Sbjct: 603 AKNQQLDKLENVNKALENRVDALKQE 628
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 25.4 bits (53), Expect(2) = 7.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 264 KQYEEQLNGLRKENFHLKLRIYFLEEKLGN 353
+++EE L GLRKE +L+ + ++E++ N
Sbjct: 1740 RKFEETLQGLRKEVGNLQEKRKIIQERVYN 1769
Score = 21.0 bits (42), Expect(2) = 7.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 333 LEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQ 431
LEE++ N + L E LQ E EEL+ Q
Sbjct: 1796 LEEEMNNRLAREKKPLEEEVRELQEENEELKNQ 1828
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,951,446
Number of Sequences: 59808
Number of extensions: 471811
Number of successful extensions: 1392
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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