Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021137
         (319 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43899-1|AAC50734.1|  540|Homo sapiens STAM protein.                   38   0.005
BC030586-1|AAH30586.1|  403|Homo sapiens STAM protein protein.         38   0.005
BC028740-1|AAH28740.1|  525|Homo sapiens signal transducing adap...    38   0.009
AF042273-1|AAC63963.1|  525|Homo sapiens signal transducing adap...    38   0.009
AC079790-2|AAY14712.1|  525|Homo sapiens unknown protein.              38   0.009

>U43899-1|AAC50734.1|  540|Homo sapiens STAM protein.
          Length = 540

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +2

Query: 65  LVDAALERADRRHARLTQLSADLVDALNLYHTLMRE 172
           L+D  LE  DR+H+ L++L+  +++AL+LY  LM E
Sbjct: 342 LIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE 377


>BC030586-1|AAH30586.1|  403|Homo sapiens STAM protein protein.
          Length = 403

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = +2

Query: 65  LVDAALERADRRHARLTQLSADLVDALNLYHTLMRE 172
           L+D  LE  DR+H+ L++L+  +++AL+LY  LM E
Sbjct: 342 LIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE 377


>BC028740-1|AAH28740.1|  525|Homo sapiens signal transducing adaptor
           molecule (SH3 domain and ITAM motif) 2 protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +2

Query: 65  LVDAALERADRRHARLTQLSADLVDALNLYHTLMRE 172
           ++D  LE  DR+H+ L++L+  +++AL LY+ L+ E
Sbjct: 332 MIDEKLEEIDRKHSELSELNVKVLEALELYNKLVNE 367


>AF042273-1|AAC63963.1|  525|Homo sapiens signal transducing adaptor
           molecule 2A protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +2

Query: 65  LVDAALERADRRHARLTQLSADLVDALNLYHTLMRE 172
           ++D  LE  DR+H+ L++L+  +++AL LY+ L+ E
Sbjct: 332 MIDEKLEEIDRKHSELSELNVKVLEALELYNKLVNE 367


>AC079790-2|AAY14712.1|  525|Homo sapiens unknown protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +2

Query: 65  LVDAALERADRRHARLTQLSADLVDALNLYHTLMRE 172
           ++D  LE  DR+H+ L++L+  +++AL LY+ L+ E
Sbjct: 332 MIDEKLEEIDRKHSELSELNVKVLEALELYNKLVNE 367


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.131    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,852
Number of Sequences: 237096
Number of extensions: 78502
Number of successful extensions: 270
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)