Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021136
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.13 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.0  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   8.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 17/60 (28%), Positives = 24/60 (40%)
 Frame = +3

Query: 612  TEESTQLWNMNPFPAWWSV*RSSPQRNPSVLRNSLSTTP*KMGRKKVTAVPRPTS*SWAT 791
            TE     W   P   WWS   +SP    +  R + +T P        +   RPT+ +W T
Sbjct: 1028 TEHMHPDWTTKP-STWWSSTTTSPWWTTTTTRRTTTTRP-----TTTSTTTRPTTTNWPT 1081


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 491 QTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGLH 595
           Q L  ++  PWI+  T YS     R+ Q   + LH
Sbjct: 208 QLLTYRAPRPWIYNETIYSLTPQGRKEQKVLKSLH 242


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -1

Query: 382 IHFRKEKGFKVHWNAGRLENFLYSVDKLRTYTVPR 278
           +  +KE G+KV W+  +    +Y  D+   +  P+
Sbjct: 303 VELQKEGGWKVVWDDTQKNTHMYKGDQWVAFDSPK 337


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = -1

Query: 787 AQLHDVGLGTAVTFLRPIFHGVVESEFRNTLGFRCGDDLQTLHHAGNG 644
           + L+D  L T V  L    H      F   L    G D ++L   G G
Sbjct: 271 SHLYDYDLTTHVMLLSDWMHEDATERFPGRLAVNTGQDPESLLINGKG 318


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/48 (29%), Positives = 18/48 (37%)
 Frame = -1

Query: 787 AQLHDVGLGTAVTFLRPIFHGVVESEFRNTLGFRCGDDLQTLHHAGNG 644
           + L+D  L T V  L    H      F   L    G D ++L   G G
Sbjct: 271 SHLYDYDLTTHVMLLSDWMHEDATERFPGRLAVNTGQDPESLLINGKG 318


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 491 QTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGLH 595
           Q L  ++  PWI   T YS     R+ Q   + LH
Sbjct: 208 QLLTYRAPRPWIHNETIYSLTPQGRKEQKVLKSLH 242


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 440 CIKGILATPDFSHTGELQTLNMKSVM 517
           C+   LA P+  +T +   +N+K ++
Sbjct: 11  CVSVALARPEDQYTIKYDNVNLKEIL 36


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 208 YVMHHLEPCNRGQQRKSYQMHLDSW 282
           +++  L+ C +      +Q HLD+W
Sbjct: 605 HIVPKLQLCMQNLVINPHQQHLDAW 629


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,957
Number of Sequences: 336
Number of extensions: 4422
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)