Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021136
         (805 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385...    29   4.3  
02_05_0944 + 32980540-32980788,32980873-32981283,32981383-329814...    29   4.3  
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675...    28   7.6  
02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070           28   7.6  
11_05_0109 + 19126849-19126917,19129883-19130620                       28   10.0 
08_02_0952 - 22981116-22981268,22981930-22981974,22982052-229821...    28   10.0 
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244...    28   10.0 

>10_08_0452 -
           18038182-18038253,18038338-18038415,18038502-18038579,
           18039112-18039168,18039276-18039349,18039424-18039495,
           18039609-18039670,18039861-18039962,18040378-18040490,
           18040809-18040940,18041156-18041243,18041617-18041711,
           18041793-18042023,18042567-18042680,18042765-18042866,
           18043091-18043207,18043301-18044146
          Length = 810

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = +2

Query: 581 GRGLHHHQRTDRREYSALEHESVPGVVECLKIITAAKSERIAKFAFDYAV 730
           G+ L   Q   RRE+     E VPGV +    IT+   E I KF  D AV
Sbjct: 562 GKPLLQEQLKVRREHLYNSFEEVPGVFQLATSITSNDLEEIQKF-LDTAV 610


>02_05_0944 +
           32980540-32980788,32980873-32981283,32981383-32981460,
           32981551-32982318
          Length = 501

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 561 WAMTSLYHVSVKIQGITDFM-FRVCSSPV*EKSGVAKIPLIQILLTAIEFTTS 406
           WA T LY ++ K Q   DF+     SS V E S   K P  Q+LL  +  T+S
Sbjct: 251 WAATWLY-LATKRQVYADFIGHEAISSSVAEFSWDLKFPGAQVLLAELNMTSS 302


>03_06_0222 +
           32466379-32466741,32466849-32466948,32467443-32467547,
           32467627-32467789,32467995-32468115,32468625-32468705,
           32468813-32468911,32468955-32468986,32468987-32469137,
           32469477-32469563,32470290-32470409,32470514-32470645,
           32470743-32470840,32470919-32471042,32471126-32471233,
           32471822-32471957,32472751-32472861,32472963-32473026,
           32473133-32473205,32473762-32473938,32474012-32474122,
           32474189-32474449,32474811-32474981,32475073-32475228,
           32475590-32475823,32475936-32476103,32476316-32476425,
           32476513-32477041
          Length = 1394

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +2

Query: 548 EVIAQREVQAPGRGLHHHQRTDRREYSALEHESVPGVVECLKIITAAKSERIAKF 712
           +V+++ E +     +    R   R  S  EHE+    V CL ++++  +E I+KF
Sbjct: 151 DVLSKPEAELCPLWIKKFNRALMRTLSFSEHETFDHPVACLLVVSSKDNEPISKF 205


>02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070
          Length = 553

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 605 RTDRREYSALEHESVPGVVE-CLKIITAAKSERIAKFAFDYAVKD 736
           R++RR  S LE    PG  E  ++   A+KSER A  A    + D
Sbjct: 45  RSERRLMSELERTVTPGAAERVIRSYVASKSERAALAALSRLLMD 89


>11_05_0109 + 19126849-19126917,19129883-19130620
          Length = 268

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 428 VNKICIKGILATPDFSHTGELQTLNMKSVMPW 523
           +NKI  KG + +PD S    L+ +N     PW
Sbjct: 192 INKILTKGAVMSPDSSIRDVLREINAHCKKPW 223


>08_02_0952 -
           22981116-22981268,22981930-22981974,22982052-22982153,
           22983262-22983468,22984783-22985042,22985338-22985442,
           22986244-22986247,22986877-22986962,22987022-22987064
          Length = 334

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 542 YSEVIAQREVQAPGRGLHHHQRTDRREYSALEH 640
           Y E  +Q+     G   HHH+R DR + + L H
Sbjct: 94  YVEDNSQKGAHGMGHHHHHHKRHDRSDKAKLNH 126


>04_03_0937 +
           20923705-20923833,20924001-20924012,20924413-20924473,
           20924523-20924749,20924859-20925104,20925645-20925657,
           20927681-20928302,20928320-20928949,20928960-20929224
          Length = 734

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 400 TRRRRKLYRC*QDLYQGYLSHS*LLSHWRATDPKHE 507
           +RRRR LY    D  +GY  H   LSH      +HE
Sbjct: 272 SRRRRHLYLVLDDWKEGYSLHKLDLSHVSGDGGEHE 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,488,376
Number of Sequences: 37544
Number of extensions: 492828
Number of successful extensions: 1148
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)