Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021136
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   1.6  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   6.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   6.3  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +2

Query: 413 VNSIAVNKICIKGILATPDFSHTGELQTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGL 592
           +N I + +  +K  L TP+ S TG    + ++   P +  +TW       R  Q     +
Sbjct: 91  MNHIGIGQEAVKH-LQTPEGSPTGPPTGIAVRFQTPDVVCITWEPPTREHRNGQITRYDV 149

Query: 593 HHHQRTD 613
             H++ D
Sbjct: 150 QFHKKID 156


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 230 GSKWCITYIFLCCYRTCVYTLS 165
           G   C T+ F+C Y   + TLS
Sbjct: 225 GFSTCYTFTFICLYLFFIITLS 246


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 127 IFFELLCRDLNMLERVYTQVR 189
           I F+ +CRD+  L R+Y   R
Sbjct: 218 IEFQKVCRDIEYLTRLYVSYR 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,677
Number of Sequences: 2352
Number of extensions: 19290
Number of successful extensions: 76
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)