Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021136
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...   162   2e-40
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...   105   5e-23
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...   102   3e-22
Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...    92   5e-19
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score =  162 bits (394), Expect = 2e-40
 Identities = 96/202 (47%), Positives = 126/202 (62%), Gaps = 10/202 (4%)
 Frame = +2

Query: 230 PATEGNKGSRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLED 409
           P TE N+  ++K T+IPGDGVGPEL+Y VQ++ K   IP++FE  F SEV+ T S+ +E+
Sbjct: 35  PPTELNQ--KLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIEN 92

Query: 410 VVNSIA-VNKICIKGILATPDFSHT-GELQTLNMKSVMPWIFTLTWYSEVIAQREVQAPG 583
            V SI   N + +KG +      HT GELQ LNM+       +L  ++ V+  + +   G
Sbjct: 93  AVESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRR----SLDLFANVVHIKTLD--G 146

Query: 584 RGLHHHQRTD--------RREYSALEHESVPGVVECLKIITAAKSERIAKFAFDYAVKDG 739
               H ++ D          EYS+LEHE VPGV+ECLKI T  K+ERIAKFAFDYA K G
Sbjct: 147 IKTRHGKQLDFVIVREQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYATKTG 206

Query: 740 PQEGDRRPKANIMKLGDGLFLR 805
            ++     KANIMKLGDGLFLR
Sbjct: 207 RKKVTAVHKANIMKLGDGLFLR 228


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score =  105 bits (251), Expect = 5e-23
 Identities = 60/185 (32%), Positives = 98/185 (52%)
 Frame = +2

Query: 251 GSRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAV 430
           G R     +PGDG+GPE++  ++ +F     PV+FE    S  +  L   ++  + +I  
Sbjct: 33  GGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVS--SSLLDGDMDAAMLAIER 90

Query: 431 NKICIKGILATPDFSHTGELQTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGLHHHQRT 610
           N + IKG + T         + + +++ +  ++    +   I     +  G  +   +  
Sbjct: 91  NGVAIKGNIETKHDDPQFNSRNVELRTKLD-LYANILHCVTIPTVPTRHSGIDIVLIREN 149

Query: 611 DRREYSALEHESVPGVVECLKIITAAKSERIAKFAFDYAVKDGPQEGDRRPKANIMKLGD 790
              EYS LEHE+VPG+VE +KI+T  K ERI++ AF+YA  +G ++     KANI KLGD
Sbjct: 150 TEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGRKKVTAVHKANIQKLGD 209

Query: 791 GLFLR 805
           GLFL+
Sbjct: 210 GLFLK 214


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score =  102 bits (244), Expect = 3e-22
 Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
 Frame = +2

Query: 251 GSRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEVNPTLSAPLEDVVNSIAV 430
           G R   T++PGDG+GPE+++ V+ +  A   PVDFE    +      S  L + + +I  
Sbjct: 49  GGRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDA-SEDLAEAITAIKR 107

Query: 431 NKICIKGILATPDFSHTGELQTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGLHHHQRT 610
           N + +KG + T   + +   + L ++  +  ++    +   I     +  G  +   +  
Sbjct: 108 NGVALKGNIETKFDNPSFVSRNLELRRQLN-LYANVLHCSTIPTVPSRHTGIDMVIIREN 166

Query: 611 DRREYSALEHESV----PGVVECLKIITAAKSERIAKFAFDYAVKDGPQEGDRRPKANIM 778
              EYS  EHE+V    P VVE LK++T  KSE+I +FAF +A K G ++     KANI 
Sbjct: 167 TEGEYSGNEHEAVNAPHPRVVESLKVVTREKSEQITRFAFQFAKKYGRKKVTAVHKANIQ 226

Query: 779 KLGDGLFLR 805
           KLGDGLFL+
Sbjct: 227 KLGDGLFLK 235


>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
 Frame = +2

Query: 245 NKGSRIKCTLIPGDGVGPELVYAVQEVFKAASIPVDFESFFFSEV---NPTLSAPLEDVV 415
           + G   + TLIPGDG+GPE+  +VQ++F+AA  P+ ++    + V   +     P    +
Sbjct: 20  SSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSR-CI 78

Query: 416 NSIAVNKICIKGILATPDFSHTGELQTLNMKSVMPWIFTLTWYSEVIAQREVQAPGRGLH 595
             +  NK+ +KG L TP       L     K      F+L  Y+ V   R ++   + L+
Sbjct: 79  ELMHANKVGLKGPLETPIGKGHRSLNLAVRKE-----FSL--YANVRPCRSLEGH-KTLY 130

Query: 596 HH------QRTDRREYSALEHESVPGVVECLKIITAAKSERIAKFAFDYAVKDGPQEGDR 757
            +      +     EYS +EHE VPGVV+ +K+IT   S  +A FAF+YA ++G +    
Sbjct: 131 DNVDVVTIRENTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTA 190

Query: 758 RPKANIMKLGDGLFL 802
             KANIM+  DGLFL
Sbjct: 191 VHKANIMRQSDGLFL 205


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
            F55H12.3 protein.
          Length = 2972

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +2

Query: 152  ISTCWKGCTHKFGNNRE-KCMLCTIWSPATEGNKGSRIKCTLIPGDGVGPELVYAVQEVF 328
            ++ C K     F N    KC+ C I +     N   ++KCT  PG  V  ++  AV E  
Sbjct: 2566 VTICVKCPEGTFANKESNKCIDCPINTYRNSTNL-DQLKCTACPGTTVTGDVTGAVDESQ 2624

Query: 329  KAASIPV-DFES 361
               + P+  FES
Sbjct: 2625 CYVNCPIGQFES 2636


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 161  CWKGCTHKFGNNREKCMLCTIWSPATEGNKGSRIKCTLIPGDGVGPE 301
            C + C + F ++ E C +C   SP    N  +   C +IP     PE
Sbjct: 1216 CAEQCPYGFNSDNEGCPICDCRSPCEFLNCPAGNVCRMIPVKCTTPE 1262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,095,076
Number of Sequences: 27780
Number of extensions: 430030
Number of successful extensions: 1157
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)