Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021135
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.3  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   5.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.5  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 338 HHDTCYRRHPDRTYEYHHHGHAEFGRQHSSTP 243
           +H   +  H    + +HHH      +QHS++P
Sbjct: 172 YHQQQHPGHSQHHHHHHHHHPHHSQQQHSASP 203


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 287 HHGHAEFGRQHSSTP*FSTGLVTSLL 210
           HHG   FG Q +S   FS  L   LL
Sbjct: 394 HHGMGMFGNQTTSPDAFSINLAGVLL 419


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 89  DGAGCSQAPPVRVQGAHPSGPG 154
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,433
Number of Sequences: 2352
Number of extensions: 13748
Number of successful extensions: 47
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)