Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021134
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   117   2e-26
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   117   2e-26
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   117   2e-26
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   117   2e-26
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...   116   3e-26
AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p pro...    31   2.1  
AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-P...    31   2.1  
AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-P...    31   2.1  
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro...    29   4.9  
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P...    29   4.9  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    29   6.5  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    29   6.5  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    29   6.5  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    29   6.5  
BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p pro...    29   8.6  
AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-P...    29   8.6  

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +2

Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
           +A  + E  G +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53  QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111

Query: 401 RRWH 412
           RRWH
Sbjct: 112 RRWH 115



 Score =  111 bits (266), Expect = 1e-24
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = +3

Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSHRLRAGKGKMRNRRRIQRKG 692
           + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKS R RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209

Query: 693 PLIIFNKDQGLTR 731
           PL++++KD+GL +
Sbjct: 210 PLVVYDKDEGLRK 222



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 249 AG 254
           AG
Sbjct: 61  AG 62



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 445 LGGSVAATGVPALVQARGHIIERFPSFP 528
           L  ++AA+GVPALVQ++GH+I+    FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +2

Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
           +A  + E  G +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53  QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111

Query: 401 RRWH 412
           RRWH
Sbjct: 112 RRWH 115



 Score =  111 bits (266), Expect = 1e-24
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = +3

Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSHRLRAGKGKMRNRRRIQRKG 692
           + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKS R RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209

Query: 693 PLIIFNKDQGLTR 731
           PL++++KD+GL +
Sbjct: 210 PLVVYDKDEGLRK 222



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 249 AG 254
           AG
Sbjct: 61  AG 62



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 445 LGGSVAATGVPALVQARGHIIERFPSFP 528
           L  ++AA+GVPALVQ++GH+I+    FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +2

Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
           +A  + E  G +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53  QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111

Query: 401 RRWH 412
           RRWH
Sbjct: 112 RRWH 115



 Score =  111 bits (266), Expect = 1e-24
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = +3

Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSHRLRAGKGKMRNRRRIQRKG 692
           + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKS R RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209

Query: 693 PLIIFNKDQGLTR 731
           PL++++KD+GL +
Sbjct: 210 PLVVYDKDEGLRK 222



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 249 AG 254
           AG
Sbjct: 61  AG 62



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 445 LGGSVAATGVPALVQARGHIIERFPSFP 528
           L  ++AA+GVPALVQ++GH+I+    FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  117 bits (281), Expect = 2e-26
 Identities = 53/64 (82%), Positives = 57/64 (89%)
 Frame = +2

Query: 221 EAALLREQGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 400
           +A  + E  G +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 53  QAYAVSELAG-HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTF 111

Query: 401 RRWH 412
           RRWH
Sbjct: 112 RRWH 115



 Score =  111 bits (266), Expect = 1e-24
 Identities = 48/73 (65%), Positives = 63/73 (86%)
 Frame = +3

Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSHRLRAGKGKMRNRRRIQRKG 692
           + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKS R RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209

Query: 693 PLIIFNKDQGLTR 731
           PL++++KD+GL +
Sbjct: 210 PLVVYDKDEGLRK 222



 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = +3

Query: 69  MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 248
           MSL  ARPLVSVY+EK+E  +     LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ 
Sbjct: 1   MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60

Query: 249 AG 254
           AG
Sbjct: 61  AG 62



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 445 LGGSVAATGVPALVQARGHIIERFPSFP 528
           L  ++AA+GVPALVQ++GH+I+    FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score =  116 bits (280), Expect = 3e-26
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +2

Query: 254 YQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 412
           +QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1   HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +3

Query: 513 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 620
           + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 88  VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123



 Score = 37.5 bits (83), Expect = 0.019
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 445 LGGSVAATGVPALVQARGHIIERFPSFP 528
           L  ++AA+GVPALVQ++GH+I+    FP
Sbjct: 65  LVSAIAASGVPALVQSKGHVIDGVSEFP 92


>AY113210-1|AAM29215.1|  872|Drosophila melanogaster AT06220p
           protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 286 TCCRP-NSACPWWWYS*VRSGC 348
           TCC P ++ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


>AE014296-2188|AAF49882.2|  271|Drosophila melanogaster CG17666-PB,
           isoform B protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 286 TCCRP-NSACPWWWYS*VRSGC 348
           TCC P ++ CPW WY    +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138


>AE014296-2187|AAN11857.1|  872|Drosophila melanogaster CG17666-PA,
           isoform A protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +1

Query: 286 TCCRP-NSACPWWWYS*VRSGC 348
           TCC P ++ CPW WY    +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739


>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
           protein.
          Length = 1953

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 74  SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 187
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
           protein.
          Length = 2528

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 74  SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 187
           ++GSP ++VG       G G S APP  V    AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
          Length = 2176

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 242  QGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 373
            +GG   T  ES GT + V ++ R   GG   SG    G +  GG
Sbjct: 918  RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
            protein.
          Length = 2342

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 242  QGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 373
            +GG   T  ES GT + V ++ R   GG   SG    G +  GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
            EAST protein.
          Length = 2362

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 242  QGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 373
            +GG   T  ES GT + V ++ R   GG   SG    G +  GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
            protein.
          Length = 2301

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 242  QGGWYQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 373
            +GG   T  ES GT + V ++ R   GG   SG    G +  GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085


>BT021271-1|AAX33419.1|  842|Drosophila melanogaster RE46655p
           protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = -3

Query: 689 LTLDTTTVAHFTLTSTKTMRLVHLKDIRPCLE---APQEDDSLFGLVDLLDFVGYNQGKL 519
           ++  TTTVA  T T+T T   V +    P +     P++   +  L+ LLD +  +  K+
Sbjct: 612 VSTSTTTVATATKTTTSTTTKVPIISTTPLIPPQPTPEKPSGVNDLLSLLDNMFADAQKM 671

Query: 518 GNLSIMCPLA*TSAGT---PVAATLPPR 444
           G+ + +  +A ++  T   PV+  L P+
Sbjct: 672 GSSTDLPLVASSTTSTVLRPVSTKLLPQ 699


>AE014134-2788|AAF53573.1|  842|Drosophila melanogaster CG13272-PA
           protein.
          Length = 842

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = -3

Query: 689 LTLDTTTVAHFTLTSTKTMRLVHLKDIRPCLE---APQEDDSLFGLVDLLDFVGYNQGKL 519
           ++  TTTVA  T T+T T   V +    P +     P++   +  L+ LLD +  +  K+
Sbjct: 612 VSTSTTTVATATKTTTSTTTKVPIISTTPLIPPQPTPEKPSGVNDLLSLLDNMFADAQKM 671

Query: 518 GNLSIMCPLA*TSAGT---PVAATLPPR 444
           G+ + +  +A ++  T   PV+  L P+
Sbjct: 672 GSSTDLPLVASSTTSTVLRPVSTKLLPQ 699


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,026,143
Number of Sequences: 53049
Number of extensions: 751880
Number of successful extensions: 4002
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3860
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)