Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021133
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   2.9  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 452 RCKHCRKQFI 423
           RC+HC +QF+
Sbjct: 39  RCEHCDRQFV 48


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 67  STGTFAFLTTK*RKMTNMIPTMWPITLTEP 156
           ST T   LTTK     +  PT  P+ +T+P
Sbjct: 166 STTTRTTLTTKFTTKPSTKPTNKPVVVTKP 195


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 452 RCKHCRKQFI 423
           RC+HC +QF+
Sbjct: 192 RCEHCDRQFV 201


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 511 KILSVLQRKRISLCYEIFRTL 573
           KIL V+++  +  C E+F  L
Sbjct: 396 KILKVIRKNLVKKCLELFEEL 416


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 381  PTTTSTSVLDSHTTYPRLG 325
            PTTTST+   + T +P  G
Sbjct: 1065 PTTTSTTTRPTTTNWPTQG 1083


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 526  ELIEFLQRSSSLRFKYNQFFILLTAVVNI 440
            ELIE   +S    F +N  F+L+  ++ +
Sbjct: 1260 ELIELRNKSVFAFFMFNALFVLVVFLLQL 1288


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 526  ELIEFLQRSSSLRFKYNQFFILLTAVVNI 440
            ELIE   +S    F +N  F+L+  ++ +
Sbjct: 1260 ELIELRNKSVFAFFMFNALFVLVVFLLQL 1288


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 631 LWRQTPQDLTDFTVYVILRTMYEKFHSIMK 542
           +W +TP+++ +F   V      +  H I++
Sbjct: 308 MWHETPEEMMEFLKSVFRLDQDQCSHRIVR 337


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 631 LWRQTPQDLTDFTVYVILRTMYEKFHSIMK 542
           +W +TP+++ +F   V      +  H I++
Sbjct: 541 MWHETPEEMMEFLKSVFRLDQDQCSHRIVR 570


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 631 LWRQTPQDLTDFTVYVILRTMYEKFHSIMK 542
           +W +TP+++ +F   V      +  H I++
Sbjct: 541 MWHETPEEMMEFLKSVFRLDQDQCSHRIVR 570


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,524
Number of Sequences: 336
Number of extensions: 3596
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)