Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021133
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089371-1|AAL90109.1|  102|Drosophila melanogaster AT19233p pro...    31   1.0  
BT012500-1|AAS93771.1|  618|Drosophila melanogaster GH10292p pro...    30   3.1  
BT016099-1|AAV36984.1|  319|Drosophila melanogaster LD27268p pro...    29   5.5  
AY069416-1|AAL39561.1|  269|Drosophila melanogaster LD11211p pro...    29   5.5  
AE014134-159|ABC65865.1|  269|Drosophila melanogaster CG3662-PB,...    29   5.5  
AE014134-158|AAF51452.1|  319|Drosophila melanogaster CG3662-PA,...    29   5.5  
BT003277-1|AAO25034.1|  747|Drosophila melanogaster LD10638p pro...    29   7.2  
AE014297-4662|AAF57084.1|  747|Drosophila melanogaster CG1322-PA...    29   7.2  
AE014297-4661|AAN14258.2|  859|Drosophila melanogaster CG1322-PC...    29   7.2  
AE014297-4660|AAF57083.1| 1054|Drosophila melanogaster CG1322-PB...    29   7.2  
M63449-1|AAA29050.1| 1060|Drosophila melanogaster zinc-finger ho...    28   9.6  
D89661-1|BAA19488.1|  929|Drosophila melanogaster myosin light c...    28   9.6  
BT011080-1|AAR82746.1| 1025|Drosophila melanogaster SD01785p pro...    28   9.6  
AY118654-1|AAM50023.1|  569|Drosophila melanogaster SD06902p pro...    28   9.6  
AF255671-1|AAG01798.1|  732|Drosophila melanogaster Stretchin-ML...    28   9.6  
AF255670-1|AAG01797.1|  786|Drosophila melanogaster Stretchin-ML...    28   9.6  
AF255669-1|AAG01796.1|  623|Drosophila melanogaster Stretchin-ML...    28   9.6  
AF255668-1|AAG01795.1|  577|Drosophila melanogaster Stretchin-ML...    28   9.6  

>AY089371-1|AAL90109.1|  102|Drosophila melanogaster AT19233p
           protein.
          Length = 102

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/58 (22%), Positives = 29/58 (50%)
 Frame = -1

Query: 382 SNNHFDFSARLTYNISSSRRFWIMKSTFRSLDAMSILNNLSTGTSLVNSEFQQTKYRF 209
           S NH   SA   + + S+   W+++  +  + + SI  +L    ++ N++ + + Y F
Sbjct: 45  SGNHPKESAHTKFVLLSTLEIWVVRREYDEMSSRSIFEDLEERYAITNNDKRDSMYNF 102


>BT012500-1|AAS93771.1|  618|Drosophila melanogaster GH10292p
           protein.
          Length = 618

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 322 FWIMKSTFRSLDAMSILNNLSTGTSLVNSEFQQT 221
           +W+     +SLD  S +NNL   TS+ NS  Q +
Sbjct: 162 YWLGDDNLQSLDMFSEINNLKNITSIYNSPSQSS 195


>BT016099-1|AAV36984.1|  319|Drosophila melanogaster LD27268p
           protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 43  FMLVIKRISTGTFAFLTTK*RKMTNMI-PTMWPITLTEPNLGKRQLRLNSMVNEAYENGI 219
           F+ +IK++STG +   T + R+   ++ P +  ++L    +      +   + E + +G+
Sbjct: 215 FVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEKFVSGV 274

Query: 220 SFAEIQNLPEKSQ 258
           S      LPE ++
Sbjct: 275 SKRSADPLPESAK 287


>AY069416-1|AAL39561.1|  269|Drosophila melanogaster LD11211p
           protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 43  FMLVIKRISTGTFAFLTTK*RKMTNMI-PTMWPITLTEPNLGKRQLRLNSMVNEAYENGI 219
           F+ +IK++STG +   T + R+   ++ P +  ++L    +      +   + E + +G+
Sbjct: 165 FVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEKFVSGV 224

Query: 220 SFAEIQNLPEKSQ 258
           S      LPE ++
Sbjct: 225 SKRSADPLPESAK 237


>AE014134-159|ABC65865.1|  269|Drosophila melanogaster CG3662-PB,
           isoform B protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 43  FMLVIKRISTGTFAFLTTK*RKMTNMI-PTMWPITLTEPNLGKRQLRLNSMVNEAYENGI 219
           F+ +IK++STG +   T + R+   ++ P +  ++L    +      +   + E + +G+
Sbjct: 165 FVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEKFVSGV 224

Query: 220 SFAEIQNLPEKSQ 258
           S      LPE ++
Sbjct: 225 SKRSADPLPESAK 237


>AE014134-158|AAF51452.1|  319|Drosophila melanogaster CG3662-PA,
           isoform A protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 43  FMLVIKRISTGTFAFLTTK*RKMTNMI-PTMWPITLTEPNLGKRQLRLNSMVNEAYENGI 219
           F+ +IK++STG +   T + R+   ++ P +  ++L    +      +   + E + +G+
Sbjct: 215 FVDLIKKMSTGYYNIDTERVRRQMRVVMPRITDVSLISERIANECFDMKVYMMEKFVSGV 274

Query: 220 SFAEIQNLPEKSQ 258
           S      LPE ++
Sbjct: 275 SKRSADPLPESAK 287


>BT003277-1|AAO25034.1|  747|Drosophila melanogaster LD10638p
           protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 314 PVEHAADLRCSRCSKQF 330


>AE014297-4662|AAF57084.1|  747|Drosophila melanogaster CG1322-PA,
           isoform A protein.
          Length = 747

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 314 PVEHAADLRCSRCSKQF 330


>AE014297-4661|AAN14258.2|  859|Drosophila melanogaster CG1322-PC,
           isoform C protein.
          Length = 859

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 426 PVEHAADLRCSRCSKQF 442


>AE014297-4660|AAF57083.1| 1054|Drosophila melanogaster CG1322-PB,
           isoform B protein.
          Length = 1054

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 621 PVEHAADLRCSRCSKQF 637


>M63449-1|AAA29050.1| 1060|Drosophila melanogaster zinc-finger
           homeodomain protein 1 protein.
          Length = 1060

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 627 PVEHSADLRCSRCSKQF 643


>D89661-1|BAA19488.1|  929|Drosophila melanogaster myosin light
           chain kinase  isoform-I protein.
          Length = 929

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 306 DFIIQNL--RDEDMLYVSRALKSKWLLDPAHEAIMTPQWLEDKL 431
           DFI Q L  R ED L   + L+SKWL     +++   +   DKL
Sbjct: 525 DFISQLLVHRKEDRLTAQQCLESKWLSQRPDDSLSNNKICTDKL 568


>BT011080-1|AAR82746.1| 1025|Drosophila melanogaster SD01785p
           protein.
          Length = 1025

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 592 PVEHSADLRCSRCSKQF 608


>AY118654-1|AAM50023.1|  569|Drosophila melanogaster SD06902p
           protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 476 PVLHLADSRCKHCRKQF 426
           PV H AD RC  C KQF
Sbjct: 136 PVEHSADLRCSRCSKQF 152


>AF255671-1|AAG01798.1|  732|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 732

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 306 DFIIQNL--RDEDMLYVSRALKSKWLLDPAHEAIMTPQWLEDKL 431
           DFI Q L  R ED L   + L+SKWL     +++   +   DKL
Sbjct: 381 DFISQLLVHRKEDRLTAQQCLESKWLSQRPDDSLSNNKICTDKL 424


>AF255670-1|AAG01797.1|  786|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 306 DFIIQNL--RDEDMLYVSRALKSKWLLDPAHEAIMTPQWLEDKL 431
           DFI Q L  R ED L   + L+SKWL     +++   +   DKL
Sbjct: 382 DFISQLLVHRKEDRLTAQQCLESKWLSQRPDDSLSNNKICTDKL 425


>AF255669-1|AAG01796.1|  623|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 623

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 306 DFIIQNL--RDEDMLYVSRALKSKWLLDPAHEAIMTPQWLEDKL 431
           DFI Q L  R ED L   + L+SKWL     +++   +   DKL
Sbjct: 219 DFISQLLVHRKEDRLTAQQCLESKWLSQRPDDSLSNNKICTDKL 262


>AF255668-1|AAG01795.1|  577|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 577

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +3

Query: 306 DFIIQNL--RDEDMLYVSRALKSKWLLDPAHEAIMTPQWLEDKL 431
           DFI Q L  R ED L   + L+SKWL     +++   +   DKL
Sbjct: 484 DFISQLLVHRKEDRLTAQQCLESKWLSQRPDDSLSNNKICTDKL 527


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,889,703
Number of Sequences: 53049
Number of extensions: 592936
Number of successful extensions: 1600
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)