Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021133
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 25 0.84
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.6
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 4.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.8
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 21 7.8
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 21 7.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.8
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 24.6 bits (51), Expect = 0.84
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 412 WGVMIAS*AGSNNHFDFSARLTYNISSSRRFWIMKSTFRSLDAMSILNNLSTGTSLVN 239
WGV++ S G FSAR+ + + I+ S +L A +L T + +N
Sbjct: 618 WGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLTGIN 675
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 417 LEDKLFPTMFTTAVSKMKNWLYLNLKDELR 506
++ + FP T V K+ +W Y K +LR
Sbjct: 155 IDVEFFPYDVQTCVLKLGSWTYDGFKVDLR 184
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 137 GHIVGIIFVIFLYFVVKNANVPVLMRLIT 51
GHIV I+F L + N VL+ LIT
Sbjct: 36 GHIVSIVFYSVLMIISAIGNTTVLI-LIT 63
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 406 VMIAS*AGSNNHFDFSARLTYNISSSRRFWIMKSTFRSLDAMSI 275
V +A S H DF+ +Y+ SSS + + S+D SI
Sbjct: 23 VSVAGYKHSRRHRDFTVAESYDASSSNSDSLSMTIPPSIDRSSI 66
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 453 AVSKMKNWLYLNLKDELRCKNSISSTKKKN 542
AV K +YL LK C N T K N
Sbjct: 477 AVENFKGGMYLRLKARRACMNYERFTYKIN 506
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 4.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 453 AVSKMKNWLYLNLKDELRCKNSISSTKKKN 542
AV K +YL LK C N T K N
Sbjct: 477 AVENFKGGMYLRLKARRACMNYERFTYKIN 506
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -1
Query: 649 TQDFKVLWRQTPQDLTDFTVYVI 581
++ V W+ QD T+ T Y++
Sbjct: 921 SRSINVKWQHKSQDTTEVTKYIL 943
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = -1
Query: 649 TQDFKVLWRQTPQDLTDFTVYVI 581
++ V W+ QD T+ T Y++
Sbjct: 917 SRSINVKWQHKSQDTTEVTKYIL 939
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 303 VDFIIQNLRDEDMLYVSR 356
V+FI ++LR+ED+ +R
Sbjct: 451 VEFIAEHLRNEDLYIQTR 468
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 210 KRYFVC*NSEFTREVPVDRLFKIDMASKLRNVDFIIQNLRDEDMLYVS 353
+RYF E+P ++ F+ A + ++ +I L D ++ S
Sbjct: 62 QRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEAS 109
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.4 bits (43), Expect = 7.8
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +3
Query: 210 KRYFVC*NSEFTREVPVDRLFKIDMASKLRNVDFIIQNLRDEDMLYVS 353
+RYF E+P ++ F+ A + ++ +I L D ++ S
Sbjct: 62 QRYFTAFMDTPLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEAS 109
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = -1
Query: 322 FWIMKSTFRSLDAMSILNNLSTGTSLVNSEFQQTKYR 212
F + ST+ + + + ILN L ++ F+Q + +
Sbjct: 282 FTAISSTYSASELVKILNELFARFDQLSERFEQLRIK 318
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,080
Number of Sequences: 438
Number of extensions: 3939
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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