Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021132
(775 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 183 5e-45
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 107 4e-22
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 91 4e-17
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 83 1e-14
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 80 7e-14
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 79 9e-14
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 79 2e-13
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 75 1e-12
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 75 2e-12
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 73 1e-11
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 70 6e-11
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 69 1e-10
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 69 2e-10
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 69 2e-10
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 67 5e-10
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 66 7e-10
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 65 2e-09
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 64 4e-09
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 61 3e-08
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 58 3e-07
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 57 4e-07
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 56 7e-07
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 48 2e-04
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 44 0.003
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 40 0.069
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.069
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 40 0.069
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.091
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.12
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 38 0.28
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 38 0.37
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 36 1.5
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 36 1.5
UniRef50_A6QSD0 Cluster: Predicted protein; n=1; Ajellomyces cap... 34 3.4
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 4.5
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 4.5
UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=... 34 4.5
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 6.0
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 6.0
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 183 bits (445), Expect = 5e-45
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G +TVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL
Sbjct: 83 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 142
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQR 509
VGILPSGLLLVTGPFAFNSCPLRRIPQR
Sbjct: 143 VGILPSGLLLVTGPFAFNSCPLRRIPQR 170
Score = 149 bits (362), Expect = 6e-35
Identities = 73/99 (73%), Positives = 75/99 (75%)
Frame = +2
Query: 467 FCFQFVPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 646
F F P+ YVIGTSTRISLGNFKLPKHFNDDYF EGDDIFA
Sbjct: 157 FAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFA 216
Query: 647 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGY 763
TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK+LRGY
Sbjct: 217 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGY 255
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = +1
Query: 91 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRQYP 264
NYDLGNGVMRFSKSKMFHKKAKYKFIG LTVVVKQIGGEKNGGTR P
Sbjct: 31 NYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVP 88
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 107 bits (256), Expect = 4e-22
Identities = 53/88 (60%), Positives = 63/88 (71%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G +TV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRVVL
Sbjct: 75 GERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVL 134
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQR 509
+ +L SGLLLVTGPFA NSCPLRR+ QR
Sbjct: 135 LKVLASGLLLVTGPFALNSCPLRRVSQR 162
Score = 86.2 bits (204), Expect = 8e-16
Identities = 44/103 (42%), Positives = 58/103 (56%)
Frame = +2
Query: 467 FCFQFVPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 646
F P+ S YVIGTS+++ LG FK+P+H ND YF DIFA
Sbjct: 149 FALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA---DIFA 205
Query: 647 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSRRL 775
KKE++VP+EQRK DQK VD A++K I A P+ K Y + +
Sbjct: 206 AKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNM 248
Score = 37.9 bits (84), Expect = 0.28
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 91 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 255
N L G++R+SK++M+ ++A Y+ VK+IGG KNGG R
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGER 77
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 90.6 bits (215), Expect = 4e-17
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 419
G + V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRV
Sbjct: 103 GTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRV 162
Query: 420 VLVGILPSGLLLVTGPFAFNSCPLRRIPQR 509
V + L SGLLLVTGP N PLRR Q+
Sbjct: 163 VFLKQLASGLLLVTGPLVLNRVPLRRTHQK 192
Score = 67.7 bits (158), Expect = 3e-10
Identities = 41/96 (42%), Positives = 52/96 (54%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 661
VP+ +VI TST+I + N K+PKH D YF EG+ IF T+KEK
Sbjct: 184 VPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQ---EGE-IFDTEKEK 239
Query: 662 YVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSR 769
Y +EQRK DQK VD ++ I A P L+GY R
Sbjct: 240 YEITEQRKIDQKAVDSQILPKIKAIP---QLQGYLR 272
Score = 37.5 bits (83), Expect = 0.37
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 100 LGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 255
L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 82.6 bits (195), Expect = 1e-14
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G + VP++R +YPT++ +R R + ++R ++ GTV ILLAG H GKRVV
Sbjct: 63 GKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVF 120
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQ 506
+ L SGLLLVTGPF N PLRRIPQ
Sbjct: 121 LKQLNSGLLLVTGPFKINGVPLRRIPQ 147
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKH-FNDDYFXXXXXXXXXXXXXXEGDDIFATKKE 658
VP+ +YVI TST I + + KLP+H F D+ + +D+F E
Sbjct: 140 VPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESYFKGEPKKKK-----RSEDMFEEAAE 194
Query: 659 KYVPSEQRKTDQKTVDEAVIKAIGARPDKK 748
+ PSEQR DQK VD+ ++ I A P+ K
Sbjct: 195 EKKPSEQRIADQKAVDDQILPKISAVPNMK 224
Score = 37.1 bits (82), Expect = 0.49
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 91 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRQYPSN 270
N +L G+ R+S+S ++ K+A YK T K IGG+KNGG R P
Sbjct: 12 NPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPVQ 70
Query: 271 VGS---PSTPLRRK 303
S P+ +RR+
Sbjct: 71 RESRYYPTEDVRRR 84
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 79.8 bits (188), Expect = 7e-14
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = +3
Query: 261 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 431
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 432 ILPSGLLLVTGPFAFNSCPLRRIPQ 506
L SGLLLVTGPF +N PLRR+ Q
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQ 138
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/103 (37%), Positives = 55/103 (53%)
Frame = +2
Query: 467 FCFQFVPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 646
F + VP+ + YVI TSTRI + F +PKH +D+YF + +F+
Sbjct: 126 FKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYFRRVDLKESKT----DAGKLFS 181
Query: 647 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSRRL 775
T+ +KY S+ RK DQK VD + AI + PD K+L Y R L
Sbjct: 182 TETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSL 224
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 79.4 bits (187), Expect = 9e-14
Identities = 45/98 (45%), Positives = 56/98 (57%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 661
VP+ VI TSTRI + N K+P+H ND YF EGD IFA+K E+
Sbjct: 135 VPLRRVHQKLVIATSTRIDISNVKVPEHINDTYFRRHKVKKEAK----EGD-IFASKPER 189
Query: 662 YVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSRRL 775
Y P+EQRK DQ VD ++KAI A+PD ML Y R +
Sbjct: 190 YTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLRTI 227
Score = 70.1 bits (164), Expect = 6e-11
Identities = 37/89 (41%), Positives = 54/89 (60%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G + V ++ FYP + + +K+ +IR +L+ GT+ ILLAG + GKRVVL
Sbjct: 56 GTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKRVVL 115
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQRM 512
+ L SGLLLV+GP N PLRR+ Q++
Sbjct: 116 LKALKSGLLLVSGPLKVNRVPLRRVHQKL 144
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 78.6 bits (185), Expect = 2e-13
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 419
G + +PLK+ + YPT++ + + +S +P S+ +R + GTV ILLAG H GKRV
Sbjct: 79 GKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRV 138
Query: 420 VLVGILPSGLLLVTGPFAFNSCPLRRIPQ 506
V + L +GLL VTGP+ N CPLRRI Q
Sbjct: 139 VFLKQLKTGLLPVTGPYGVNGCPLRRINQ 167
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/93 (37%), Positives = 51/93 (54%)
Frame = +2
Query: 485 PVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKY 664
P+ + YVI TST++ L KLP+ +D YF EG+ IF K +++
Sbjct: 161 PLRRINQIYVIATSTKLDLSKVKLPEGLDDRYFKRNKGPKRGRKD--EGE-IFEAKPQEH 217
Query: 665 VPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGY 763
V SE+ K Q VD+ V++A+ A P+KKML Y
Sbjct: 218 VVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHY 250
Score = 46.8 bits (106), Expect = 6e-04
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +1
Query: 91 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRQYP 264
N+ L GV FS+SKMFHK+ +K V VK++ GEKNGG R P
Sbjct: 27 NHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLP 84
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +3
Query: 330 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 509
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/86 (37%), Positives = 44/86 (51%)
Frame = +2
Query: 467 FCFQFVPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 646
F + VP+ + YVI T TRI + N K+P ND++F D IFA
Sbjct: 132 FKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFA 186
Query: 647 TKKEKYVPSEQRKTDQKTVDEAVIKA 724
+++KY S+ RK QK VD A+I A
Sbjct: 187 EEEKKYTVSDDRKKLQKQVDTALIAA 212
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +3
Query: 258 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 437
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 438 PSGLLLVTGPFAFNSCPLRRIPQR 509
SGLLLVTGPF+FN PLRR+ R
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSR 92
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/83 (42%), Positives = 53/83 (63%)
Frame = +3
Query: 261 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 440
P ++ + +YP ++ + + + H ++RP+L+ GT+ ILLAGR GKRV+L+ L
Sbjct: 26 PSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLG 83
Query: 441 SGLLLVTGPFAFNSCPLRRIPQR 509
G+LLVTGPF N PLRR+ R
Sbjct: 84 QGVLLVTGPFKLNGVPLRRVNAR 106
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 70.1 bits (164), Expect = 6e-11
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G + VP K+ +YP +K + K + +RP++K GT+ ILLAG G RVV+
Sbjct: 34 GYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIVILLAGVFRGSRVVV 92
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQR 509
+ L SG LLVTGP+A N PL R+ QR
Sbjct: 93 LKQLDSGQLLVTGPYAVNRIPLTRVDQR 120
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +3
Query: 261 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 440
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLA 114
Query: 441 SGLLLVTGPFAFNSCPLRRIPQ 506
SGLLLVTGPF N PLRR+ Q
Sbjct: 115 SGLLLVTGPFKINGVPLRRVNQ 136
Score = 56.8 bits (131), Expect = 6e-07
Identities = 37/93 (39%), Positives = 49/93 (52%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 661
VP+ + AYVIGTST++ + L K F+D YF EG+ A K+EK
Sbjct: 129 VPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYFGKVAEKKKKKT---EGEFFEAEKEEK 184
Query: 662 YVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRG 760
+ +K DQK VD A+IKAI A P+ K G
Sbjct: 185 KEIPQGKKDDQKAVDAALIKAIEAVPELKTYLG 217
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 306 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 485
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 486 PLRRI 500
P+RR+
Sbjct: 80 PVRRV 84
Score = 39.1 bits (87), Expect = 0.12
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 661
VPV + AY+I TST++ + + K F D+YF D TK +
Sbjct: 79 VPVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNR 136
Query: 662 YVPSEQRKTDQKTVDEAVIKAIGARP 739
V SE+RK Q+ +D ++I +I + P
Sbjct: 137 VV-SEERKKTQQALDASIIPSIQSNP 161
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/93 (38%), Positives = 51/93 (54%)
Frame = +2
Query: 485 PVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKY 664
P+ A+VI TS ++++ K+P+H ND+YF G +IFA+ K +Y
Sbjct: 113 PLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEY 166
Query: 665 VPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGY 763
SEQRK D KTVD ++ AI P+ K L GY
Sbjct: 167 TVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGY 199
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 351 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQ 506
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQ 119
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 66.9 bits (156), Expect = 5e-10
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 458
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 459 TGPFAFNSCPLRRIPQ 506
TGPF N P+RR+ Q
Sbjct: 110 TGPFKINGVPIRRVNQ 125
Score = 50.4 bits (115), Expect = 5e-05
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKE- 658
VP+ + YVI TST++ + + K F+D YF EG+ +F T+KE
Sbjct: 118 VPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYFSRDKKQKAKKT---EGE-LFETEKEA 172
Query: 659 -KYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRG 760
K +P E +K DQK VD +IKAI A PD K G
Sbjct: 173 TKNLP-EFKKEDQKVVDAELIKAIEAVPDLKTYLG 206
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 66.5 bits (155), Expect = 7e-10
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G + + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQR 509
+ L SGL+L+TGPF N PLRRI QR
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQR 139
Score = 40.7 bits (91), Expect = 0.039
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +2
Query: 482 VPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEK 661
VP+ YVI TST+I + + K+ ND YF D+ K EK
Sbjct: 131 VPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDE---KKAEK 187
Query: 662 YVPSEQRKTDQKTVDEAVIKAI 727
++ R DQK+VD A++ +
Sbjct: 188 KKIADSRVADQKSVDSAILAVL 209
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/101 (36%), Positives = 51/101 (50%)
Frame = +2
Query: 467 FCFQFVPVTPHSSAYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFA 646
F VPV + +V+ TST+I + K+P DDYF E DIF
Sbjct: 17 FSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------EKKDIFE 70
Query: 647 TKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSR 769
K++Y ++ RK DQKT+D AV+ +I D K+L GY R
Sbjct: 71 QGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLR 111
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 324 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 497
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 498 IPQR 509
+ R
Sbjct: 84 VNAR 87
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +3
Query: 345 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 509
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ R
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPR 122
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 57.6 bits (133), Expect = 3e-07
Identities = 46/145 (31%), Positives = 73/145 (50%)
Frame = +3
Query: 267 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 446
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 447 LLLVTGPFAFNSCPLRRIPQRM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAK 626
LL++GPF N PLRR+ R + ATS T + + + NV+ AK
Sbjct: 62 TLLISGPFKVNGVPLRRVNAR--------YVIATS----TKVSVEGVNVEK-FNVEYFAK 108
Query: 627 RVMTSLPQKKRNTFHLSSAKPIRRQ 701
+T +K+ N F K I+ +
Sbjct: 109 EKLTKKEKKEANLFPEQQNKEIKAE 133
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 57.2 bits (132), Expect = 4e-07
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 8/91 (8%)
Frame = +3
Query: 252 QTVPLKRRK----SFYPTQEK----IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHA 407
Q++P K+R ++Y + ++ +R RP + +R+I P G V ILL+GR
Sbjct: 19 QSMPAKKRSVRIGNWYKSDDEKVHFVRKRKAPRPAT--LRKIVP----GQVLILLSGRFQ 72
Query: 408 GKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 500
GKRVV + L SGLLLVTGPF N PL+R+
Sbjct: 73 GKRVVFLKQLKSGLLLVTGPFKINGVPLKRV 103
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 56.4 bits (130), Expect = 7e-07
Identities = 37/85 (43%), Positives = 43/85 (50%)
Frame = +3
Query: 375 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRM*SAPPPEFHSATSN 554
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q S F
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQ---SVVISTFTKVDIC 69
Query: 555 CQNTSMMITSRRIRSASNVQSNAKR 629
TS +T + S Q+ A R
Sbjct: 70 KVKTSKHLTDASFKKQSAAQAQAPR 94
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +3
Query: 351 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQR 509
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI R
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSR 82
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 354 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 467
RP+LK+GTV I++ G H GKR V+V +G++ + GP
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGP 90
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 39.9 bits (89), Expect = 0.069
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 411 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQ 506
KRVV + L SGLLL+TG F N PLRR+ Q
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQ 187
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.069
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +3
Query: 354 RPNLKIGTVCILLAGRHAGKRVVLVGILP 440
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 39.9 bits (89), Expect = 0.069
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 357 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 500
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRM 48
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.091
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +3
Query: 357 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 500
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.12
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +3
Query: 282 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 461
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 462 GPFAFNSCP 488
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 37.9 bits (84), Expect = 0.28
Identities = 29/88 (32%), Positives = 44/88 (50%)
Frame = +3
Query: 246 GNQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 425
G V L++ K + + + + S P KH + + N TV I++ G+H +RVV
Sbjct: 100 GTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVLIIITGQH--RRVVF 152
Query: 426 VGILPSGLLLVTGPFAFNSCPLRRIPQR 509
+ L G LL+TGP A N L R Q+
Sbjct: 153 LKQLSRGFLLITGPLALNLVLLYRTHQK 180
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 37.5 bits (83), Expect = 0.37
Identities = 26/71 (36%), Positives = 37/71 (52%)
Frame = +3
Query: 297 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 476
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 477 NSCPLRRIPQR 509
N PL RI +R
Sbjct: 65 NGIPLFRIDER 75
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 35.5 bits (78), Expect = 1.5
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 653 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKMLRGYSR 769
KEKY +EQRK DQK VD ++ + P LRGY R
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTP---QLRGYLR 38
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 363 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 500
+ IG V + + GR AG++ V+V I+ +++TGP RR+
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRV 50
>UniRef50_A6QSD0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 906
Score = 34.3 bits (75), Expect = 3.4
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
Frame = +3
Query: 291 TQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPF 470
+Q A S + + R I+ L + + +L+ RH R VL+ P P
Sbjct: 179 SQTSTPAGSSMKSAQQSQREIKHPLPVNSAAAVLSSRHNHGRAVLLR-RPKAESDHVEPL 237
Query: 471 AFNSCPLRRI--PQRM*SAPPPEFHSATSN-CQNTSMMITSRRIRSASNVQSNAKRVMTS 641
+ C R P + ++ P ++ +N C N++ ++ +R++ N S AK +
Sbjct: 238 PGSPCLNRTTARPLHLRASHPAISNNDVNNMCSNSTSVVQGYSLRNSWNHNSFAKSQFEA 297
Query: 642 LPQ-KKRNTFHLSSAKP 689
LP +R+T++ +S +P
Sbjct: 298 LPLCPQRDTYYANSEEP 314
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +3
Query: 321 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 479
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 249 NQTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 368
N+ LK SF P + + ASS GRP K +R+R LK
Sbjct: 132 NREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=7;
Pezizomycotina|Rep: Translation factor pelota, putative
- Aspergillus clavatus
Length = 410
Score = 33.9 bits (74), Expect = 4.5
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 247 GTRQYPSNVGSPSTPLRRKSVPHLVAVHSASMYAGS 354
G ++Y +V S +TP ++ +P LV VHSAS Y S
Sbjct: 237 GFQKYIQSVASTTTPALKRLLPSLVVVHSASGYLHS 272
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 6.0
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 436 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 302
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 33.5 bits (73), Expect = 6.0
Identities = 28/85 (32%), Positives = 40/85 (47%)
Frame = +3
Query: 519 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 698
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 699 QSTRL*SKPSEPDPTRRCSADTQGG 773
SKPS T+ S+ G
Sbjct: 72 DDVNESSKPSR---TKAASSSNSAG 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,617,441
Number of Sequences: 1657284
Number of extensions: 15571792
Number of successful extensions: 43319
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 41424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43255
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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