Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021129
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 127 1e-30
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 125 7e-30
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 110 2e-25
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 108 9e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 86 4e-18
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.29
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.87
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 1.5
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.5
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 6.1
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 25 8.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 127 bits (307), Expect = 1e-30
Identities = 71/139 (51%), Positives = 81/139 (58%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
I DAKRLIGRKF+D VQ+ MKHWPF + +Q G + P +
Sbjct: 65 IFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMK 124
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + FNDS RQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 125 MRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLD 184
Query: 621 KKGTGERNVLIFDLGGGTF 677
+ GE NVLIFDLGGGTF
Sbjct: 185 RSNQGESNVLIFDLGGGTF 203
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 76.6 bits (180), Expect = 3e-15
Identities = 50/123 (40%), Positives = 59/123 (47%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLI 525
+S GKP +V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TV A
Sbjct: 93 ISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQ 152
Query: 526 DKPQKMQVPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIED 705
+ K P L FDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEE 212
Query: 706 GIF 714
GIF
Sbjct: 213 GIF 215
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 125 bits (301), Expect = 7e-30
Identities = 69/139 (49%), Positives = 81/139 (58%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
I DAKRLIGR+F D VQ+ MKHWPF + + +Q G + P +
Sbjct: 65 IFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLK 124
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + + FNDS RQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 125 MRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLD 184
Query: 621 KKGTGERNVLIFDLGGGTF 677
+ E NVLIFDLGGGTF
Sbjct: 185 RSNQHETNVLIFDLGGGTF 203
Score = 112 bits (269), Expect = 5e-26
Identities = 51/58 (87%), Positives = 55/58 (94%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
Score = 70.5 bits (165), Expect = 2e-13
Identities = 46/123 (37%), Positives = 58/123 (47%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLI 525
+ GKP +V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TV A
Sbjct: 93 IEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQ 152
Query: 526 DKPQKMQVPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIED 705
+ K P L FDVS+LTIE+
Sbjct: 153 RQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEE 212
Query: 706 GIF 714
GIF
Sbjct: 213 GIF 215
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 110 bits (264), Expect = 2e-25
Identities = 62/139 (44%), Positives = 80/139 (57%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
+ DAKRLIGR++ED Q +KHWPF ++ + G ++ + +
Sbjct: 69 VFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTK 128
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + + + F+DS R ATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 129 MKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLD 188
Query: 621 KKGTGERNVLIFDLGGGTF 677
K +NVLIFDLGGGTF
Sbjct: 189 AKSDKPKNVLIFDLGGGTF 207
Score = 100 bits (239), Expect = 2e-22
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 80 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/54 (53%), Positives = 37/54 (68%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLA 507
+ + G P +V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITV A
Sbjct: 97 IDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPA 150
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 108 bits (259), Expect = 9e-25
Identities = 59/139 (42%), Positives = 84/139 (60%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
I D KRLIGRKF++ T+ +K +PF + V+ ++ G ++ P +
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + + FND+ RQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 621 KKGTGERNVLIFDLGGGTF 677
K T E++++++DLGGGTF
Sbjct: 218 KTDT-EKHIVVYDLGGGTF 235
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 253
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 86.2 bits (204), Expect = 4e-18
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +3
Query: 510 FNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 677
FNDS RQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTF
Sbjct: 194 FNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTF 247
Score = 72.9 bits (171), Expect = 4e-14
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 247
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 248 NP 253
NP
Sbjct: 109 NP 110
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 397 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLA 507
KT+ P ++ +L+KM+ETA YLGK V+NAV+TV A
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPA 192
Score = 26.6 bits (56), Expect = 3.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 273 KRLIGRKFEDATVQAVMKHWPF 338
KRLIGR+F++ VQ +K P+
Sbjct: 118 KRLIGRRFKEPEVQRDIKEVPY 139
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 68 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 247
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 248 N 250
N
Sbjct: 63 N 63
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 510 FNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTF 677
F D R+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G +
Sbjct: 152 FTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNY 211
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 30.3 bits (65), Expect = 0.29
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTT 259
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 260 DXR 268
R
Sbjct: 85 SIR 87
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 75 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 170
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 61 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 240
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 241 GDEPHNRXSMPNGSSDVSSK 300
++P S+P S+ K
Sbjct: 532 -EKPEEIPSVPPLPSNFKDK 550
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 551 GTCIFCGLSMRVIEDARTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 551 GTCIFCGLSMRVIEDARTVITAFCTVLPR*ASAVSFIF 438
G C+FCGL+ D+ T+ C R A+ +S ++
Sbjct: 1827 GLCLFCGLTKFEHADSDMAYTSDCRSWARKANLISLVY 1864
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 161 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARL 3
G W SP S + H ++++ +F +RVL C+ L K +K+A L
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALL 323
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 25.4 bits (53), Expect = 8.1
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -1
Query: 552 WYLHLLWLVYESH*RRENRDNCILHSFAEISFGSFLHFRKHHGTDFLGEKGFVF-TLICY 376
WY H+ W++ + RR R + ++++ F+ F H F+F +L C
Sbjct: 168 WYAHVGWMIILQNPRRIGRSD-----VSDLNSDPFVMFNHRHFLPIASFMAFIFPSLFCG 222
Query: 375 L 373
L
Sbjct: 223 L 223
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,119,022
Number of Sequences: 5004
Number of extensions: 66605
Number of successful extensions: 232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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