Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021129
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 3e-31
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 4e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 130 1e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 106 2e-23
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 67 1e-11
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 2e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.93
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 31 1.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.8
SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5) 29 4.9
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.9
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 29 4.9
SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_50518| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-32) 28 6.5
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 6.5
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.6
SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8) 28 8.6
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPT 256
MNPT
Sbjct: 61 MNPT 64
Score = 104 bits (249), Expect = 8e-23
Identities = 51/56 (91%), Positives = 51/56 (91%)
Frame = +3
Query: 510 FNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 677
FNDS RQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTF
Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTF 298
Score = 79.4 bits (187), Expect = 3e-15
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLA 507
V++ G+PK KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TV A
Sbjct: 120 VNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/100 (36%), Positives = 44/100 (44%)
Frame = +1
Query: 415 EVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLIDKPQKMQVPSQA*TFSESSMNPX 594
++SSMVL KMKETAEAYLG V +AV+TV A + K P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 595 XXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIEDGIF 714
+ L FDVS+L+IEDGIF
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIF 310
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFD 341
I DAKRLIGR+F+D V+ MKHW F+
Sbjct: 67 IFDAKRLIGRRFDDPGVKDDMKHWSFE 93
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 510 FNDSHRQATKDAG 548
FNDS RQATKDAG
Sbjct: 175 FNDSQRQATKDAG 187
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
Score = 130 bits (313), Expect = 1e-30
Identities = 70/139 (50%), Positives = 85/139 (61%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
+ DAKRLIGRKF+D V M HWPF + + +Q G +++ FP +
Sbjct: 67 VFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTK 126
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + + F+DS RQATKDAGTI+GLNVLRIINEPTAAAIAYGLD
Sbjct: 127 MKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLD 186
Query: 621 KKGTGERNVLIFDLGGGTF 677
KK ERNVLI+DLGGGTF
Sbjct: 187 KKVGVERNVLIYDLGGGTF 205
Score = 83.4 bits (197), Expect = 2e-16
Identities = 51/123 (41%), Positives = 62/123 (50%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLI 525
+ +G +PK +V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TV A
Sbjct: 95 IREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQ 154
Query: 526 DKPQKMQVPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIED 705
+ K P L FDVS+LTIED
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIED 214
Query: 706 GIF 714
GIF
Sbjct: 215 GIF 217
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 130 bits (314), Expect = 1e-30
Identities = 71/139 (51%), Positives = 86/139 (61%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
I DAKRLIGR+++DATVQ+ MK WPF + +Q G R+ +
Sbjct: 67 IFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGK 126
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + Q FNDS RQATKDAGTI+GLNVLR+INEPTAAA+AYGLD
Sbjct: 127 MKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLD 186
Query: 621 KKGTGERNVLIFDLGGGTF 677
K +GE+NVLIFDLGGGTF
Sbjct: 187 KSLSGEKNVLIFDLGGGTF 205
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNP 253
+NP
Sbjct: 61 LNP 63
Score = 77.4 bits (182), Expect = 1e-14
Identities = 51/121 (42%), Positives = 59/121 (48%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLI 525
+SD KPK +V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITV A
Sbjct: 95 ISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQ 154
Query: 526 DKPQKMQVPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIED 705
+ K P + L FDVSILTI+D
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDD 214
Query: 706 G 708
G
Sbjct: 215 G 215
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 106 bits (255), Expect = 2e-23
Identities = 60/139 (43%), Positives = 81/139 (58%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
+ DAKRLIGR ++D +VQ +K +PF ++ VQ + + +
Sbjct: 765 VFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTK 824
Query: 441 NEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
+ + + FND+ RQATKDAG I+GL V+RIINEPTAAAIAYG+D
Sbjct: 825 MKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMD 884
Query: 621 KKGTGERNVLIFDLGGGTF 677
KK GE+N+L+FDLGGGTF
Sbjct: 885 KK-EGEKNILVFDLGGGTF 902
Score = 102 bits (244), Expect = 3e-22
Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTT 259
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP-- 761
Query: 260 DXRCQTAHRT*VRRCYCSSRHEALAFRXLSVMEANLSSR*HIRVKTK 400
+ A R R +S L F V++ N + H++VK K
Sbjct: 762 ENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKN--KKPHVQVKVK 806
Score = 69.3 bits (162), Expect = 3e-12
Identities = 48/123 (39%), Positives = 59/123 (47%)
Frame = +1
Query: 346 VSDGGKPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLI 525
V KP +V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TV A
Sbjct: 793 VDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 852
Query: 526 DKPQKMQVPSQA*TFSESSMNPXXXXXXXXXXXXXXENEMYLSLTSAAVPFDVSILTIED 705
+ K T P E + L FDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKKEGEKNI-LVFDLGGGTFDVSLLTIDN 911
Query: 706 GIF 714
G+F
Sbjct: 912 GVF 914
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 67.3 bits (157), Expect = 1e-11
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*VQGSI*G*RQNLFPRGSQFHGAYE 440
I DAKR IG+ F + + K + F R G + G + N + G Y
Sbjct: 96 IYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN--AGFLVGKKGNFTVITPEEIGGYV 153
Query: 441 NEGNCRSLSRQNCA----ECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIA 608
+ R+++ +N + F+ R AT A +++G+ VLR+INEPTAAA+A
Sbjct: 154 IK-KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALA 212
Query: 609 YGLDKKGTGERNVLIFDLGGGT 674
YGL KK G NV++ DLGGGT
Sbjct: 213 YGLHKK-EGVANVMVVDLGGGT 233
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP 253
+NP
Sbjct: 90 INP 92
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 53.6 bits (123), Expect = 2e-07
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Frame = +3
Query: 261 IXDAKRLIGRKFEDATVQAVMKHWPFDXCQ*WRQT*-VQGSI*G*RQNLFPRGSQFHGAY 437
I KR IGRKF D VQ + H P+ + + +Q G +Q +F +
Sbjct: 123 ISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLG-KQEVFSPEQVMAMLF 181
Query: 438 ENEGNCRSLS-RQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYG 614
++ + +C + D R+ DA +GLN LR++N+ TA ++AYG
Sbjct: 182 TRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYG 241
Query: 615 LDKKG---TGERNVLIFDLG 665
+ K+ RNV+ D+G
Sbjct: 242 IYKQDLPTDKPRNVVFVDIG 261
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 373 KVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITV 501
+V Y G+ + F PE+V +M+ T++K TAE L V + VI+V
Sbjct: 161 QVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISV 203
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/71 (53%), Positives = 41/71 (57%), Gaps = 26/71 (36%)
Frame = +3
Query: 510 FNDSHRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGL 617
FND+ RQATKDAGTI+GL+VL RIINEPTAAAIAYGL
Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108
Query: 618 DKK--GTGERN 644
DK G ERN
Sbjct: 109 DKARGGKAERN 119
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = +1
Query: 388 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLA 507
GE ++F PE++S++VL ++K AEA+LG+ V+ AVITV A
Sbjct: 8 GEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = +3
Query: 510 FNDSHRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGT 674
FN + R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASS 174
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 382 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITV 501
Y+ D TF PEE+ M+L + E + +++ V+TV
Sbjct: 73 YQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTV 112
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 361 KPKFKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVLASSMTLIDKPQK 540
+PKFK + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 541 MQ 546
Q
Sbjct: 714 SQ 715
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5)
Length = 585
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 196 HRHRASHRRCRQEPGGDEPHNRXSMPNGSSDVSSKMLLFKPS*STGL 336
HRH AS R R + G H+R S+ + D ++ ++ P S G+
Sbjct: 430 HRHAASERDARSDGSGRHRHSR-SVTSEPPDPPNRRIMTPPLPSNGM 475
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 127 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGG--DEPHNRXSMPNG 279
P R DH R ++ RH A +R +EPGG + P PNG
Sbjct: 942 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVHEGPFPHQPHPNG 994
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 127 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGG--DEPHNRXSMPNG 279
P R DH R ++ RH A +R +EPGG + P PNG
Sbjct: 75 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGGVHEGPFPHQPHPNG 127
>SB_842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 166 QQDHSVLCCVHRHRASHRRCRQEPGGDEPHNRXSMPN 276
Q+ +V C + HR HRR R PH+R ++P+
Sbjct: 185 QKQTAVRCQLLEHRG-HRRMRARSAASGPHSRVAIPH 220
>SB_50518| Best HMM Match : 7tm_1 (HMM E-Value=7.8e-32)
Length = 375
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 181 VLCCVHRHRASHRRCRQEPGGDEPHNRXSMPNGSSDVSSKMLL 309
+LCC R + RRCR E +R + +G ++S+K LL
Sbjct: 308 ILCCGKRSKEGKRRCRYLTTSSESSDRQTNMSG-HNMSAKELL 349
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 408 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSRVFN 515
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)
Length = 625
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 414 GSQFHGAYENEGNCRSLSRQNCAECSYHGSRVFNDSHRQATKDAGTISGLNVLRIINEPT 593
G F + N RS + E SR+F+D+HRQ +K +G + R +E
Sbjct: 349 GCTFSPVRSKDKNVRSDGQGEQKEEETQYSRLFSDTHRQVSKSFILENGKEITRKDSEAE 408
Query: 594 AAAI-AYGLDKKGTGERNVLIFD 659
+ + A + E+ V I D
Sbjct: 409 STNMDARDNGRTSVDEKRVRILD 431
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,470,062
Number of Sequences: 59808
Number of extensions: 564977
Number of successful extensions: 1826
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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