Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021127
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81589-6|CAE17910.1| 85|Caenorhabditis elegans Hypothetical pr... 30 1.3
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 29 3.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical ... 29 4.1
AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. 29 4.1
Z75552-5|CAA99938.1| 208|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 28 5.4
Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 28 7.1
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 28 7.1
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 28 7.1
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 9.4
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 9.4
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 9.4
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z81589-6|CAE17910.1| 85|Caenorhabditis elegans Hypothetical
protein T08G5.12 protein.
Length = 85
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 425 FEEEMKKVLVYLKGFDPEQRIKLARMTACGSVTDACLHPCCW 550
F+ +KK+ + +PEQ ++ ++T G++TD C C W
Sbjct: 33 FQICVKKMEKMCRIINPEQCAQVNKITEIGALTDCCTGLCSW 74
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 630 LMLDDREHFQHEVQRQVVLQQMFVHQDQQ 544
L L ++ QH++Q+Q+ +QQ HQ QQ
Sbjct: 832 LQLQQQQLMQHQLQQQLQMQQHQQHQQQQ 860
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 630 LMLDDREHFQHEVQRQVVLQQMFVHQDQQ 544
L L ++ QH++Q+Q+ +QQ HQ QQ
Sbjct: 2211 LQLQQQQLMQHQLQQQLQMQQHQQHQQQQ 2239
>AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical
protein Y54G9A.7 protein.
Length = 244
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +2
Query: 365 RNFEQVFVKLMR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 490
R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172
>AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein.
Length = 244
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Frame = +2
Query: 365 RNFEQVFVKLMR--RYKYL--EKMFEEEMKKVLVYLKGFDPEQRIK 490
R +++ F K + R K L E+ F++ MK +L L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172
>Z75552-5|CAA99938.1| 208|Caenorhabditis elegans Hypothetical
protein W04D2.5 protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 525 MRAYIRAAGPGERTSAEGQPGAGLRAGSVRDH 620
+R ++ GPG T +G AG+ S+ DH
Sbjct: 161 VRVQVKGLGPGRMTCVKGLTVAGVHVVSISDH 192
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = -1
Query: 393 SFTKTCSKFRMVSIS*LAEKKQVLVLGDSPSIDTEPPGRNRPPAMSNRI*LRHSIGSRVL 214
SF + S+ M + + K++ L +P +PP R A I +G RV
Sbjct: 49 SFISSGSEDVMSPVQKRVQPKRMAQLKIAPLPLVQPPPPPRTRACQRPIRYSFDVGERVA 108
Query: 213 IRPSLGTCRLRRDRHRPAPDP-VPERR 136
++P L + R RPA +P R+
Sbjct: 109 VKPCLKSATKTPIRVRPADGAMIPPRK 135
>Z92832-3|CAB07372.1| 333|Caenorhabditis elegans Hypothetical
protein F31D4.4 protein.
Length = 333
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 564 FVHQDQQHGCRHASVTDPHAVMRASLMRCSGS 469
F D +H C +VTD + + +L R SGS
Sbjct: 194 FEEVDTEHNCDIITVTDDYGISGRTLFRLSGS 225
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 76 VNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAK 243
V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ K
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQK 376
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 121 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAKSYSITHCW 267
T T +AT P +TQPT+T T P +TT + + W
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSW 260
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 121 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAKSYSITHCW 267
T T +AT P +TQPT+T T P +TT + + W
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSW 256
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 121 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAKSYSITHCW 267
T T +AT P +TQPT+T T P +TT + + W
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTTTPKVNSW 199
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 209 RIKTRLPMLWRSHIRLLIAGGLFLPGGSVSMDGESPKTNTCFFSAN*DMDTMRNFEQVFV 388
RI+ ++ I+ LI G ++ P+ F + DMDT E +++
Sbjct: 833 RIELEKRVIKSEEIQKLINDGCCCAPNFITDTYGIPEKRQKFEEYSEDMDT--KIETIYL 890
Query: 389 KLMRRYKYLEKMFEEEMKKVLVYLKGFDPEQRIK-LARMT 505
K +Y+EK+FE + L FD ++ + LA +T
Sbjct: 891 KTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLANLT 930
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 372 KFRMVSIS*LAEKKQVLVLGDSPSIDTEPPGRNRPPAMS 256
+F +VS++ +A +L + +I T P N PPA+S
Sbjct: 352 QFLVVSLANMAYAYDILTFNEVRTIRTAPSCENSPPALS 390
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 372 KFRMVSIS*LAEKKQVLVLGDSPSIDTEPPGRNRPPAMS 256
+F +VS++ +A +L + +I T P N PPA+S
Sbjct: 349 QFLVVSLANMAYAYDILTFNEVRTIRTAPSCENSPPALS 387
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 58 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 159
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 58 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 159
KN+Y N + +E K R +S W RVW
Sbjct: 493 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 526
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 58 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 159
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 58 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 159
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,529,101
Number of Sequences: 27780
Number of extensions: 345168
Number of successful extensions: 1255
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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