Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021126
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z47812-10|CAH04720.1|  979|Caenorhabditis elegans Hypothetical
           protein T05H10.5c protein.
          Length = 979

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 583 KSSAIFILLHNYVYCIERLNKKGKSNSYANVLAHYKRTIIVV 458
           +  AI  LL N+V C   L K G SN Y   L   ++ +  V
Sbjct: 104 EEDAIEFLLINFVRCHHELGKSGTSNCYKKTLESTRKAVFSV 145


>Z47812-6|CAC70105.1|  984|Caenorhabditis elegans Hypothetical
           protein T05H10.5b protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 583 KSSAIFILLHNYVYCIERLNKKGKSNSYANVLAHYKRTIIVV 458
           +  AI  LL N+V C   L K G SN Y   L   ++ +  V
Sbjct: 108 EEDAIEFLLINFVRCHHELGKSGTSNCYKKTLESTRKAVFSV 149


>Z47812-5|CAA87792.1|  980|Caenorhabditis elegans Hypothetical
           protein T05H10.5a protein.
          Length = 980

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 583 KSSAIFILLHNYVYCIERLNKKGKSNSYANVLAHYKRTIIVV 458
           +  AI  LL N+V C   L K G SN Y   L   ++ +  V
Sbjct: 104 EEDAIEFLLINFVRCHHELGKSGTSNCYKKTLESTRKAVFSV 145


>AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical
           protein C33E10.8 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 690 SITVTEADGSYCYVRRDICGLISMRI*ANDNNLCLRRVRQFL 565
           SIT+TE+     Y  R++ G+   RI    +NL  RR+ ++L
Sbjct: 119 SITITESSDDCFYFFRELIGVRFHRITLQTSNLNFRRIGKWL 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,310,896
Number of Sequences: 27780
Number of extensions: 361712
Number of successful extensions: 678
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)