Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021125
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    41   1e-05
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   2.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 18/45 (40%), Positives = 29/45 (64%)
 Frame = +3

Query: 570 SMSHDIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFGLAK 704
           S++  +  G++ L   R+VHRDL   N+LV     VK++DFGL++
Sbjct: 596 SIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR 640


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 344 VRATLTFFIATI*PPL*RSRALYTVPYAPVQLDSVL 237
           +R  + FF+A +   L R    YT+ Y  V L  +L
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKYDNVNLKEIL 36


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 379 IALLRQLEAYRHPNIVRLLDVCH 447
           IA  R  E Y  P +  LLD  H
Sbjct: 188 IAKFRLQEGYHVPELCELLDAIH 210


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 283 LYTLSHMHLYN*TQFFIFLCILK*CTDIVN 194
           LYTLS M      QF  F+ +LK    +VN
Sbjct: 170 LYTLSKMSQVMLIQFCAFVVVLKQKFCVVN 199


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 632 SVHNAMRVQEVHP*YYIVGHASNPALW 552
           S H  +  Q +HP    +GH   P  W
Sbjct: 59  SAHTVLIPQPLHPSVPRLGHPQWPFAW 85


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 739 TTLVSFISTS*VLARPKSASLTRPAAV 659
           TTL +  ++   + RPKSASL+ P  V
Sbjct: 258 TTLKNNRASPYPMQRPKSASLSPPPHV 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,467
Number of Sequences: 336
Number of extensions: 3689
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)