Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021125
         (805 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    57   2e-10
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    48   8e-08
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    47   2e-07
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    47   2e-07
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    45   7e-07
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    44   1e-06
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                41   2e-05

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 26/60 (43%), Positives = 35/60 (58%)
 Frame = +3

Query: 534 RAPGPLPESRIRSMSHDIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFGLAKTYD 713
           R  G   +   R  +  ++   D+LHS  I++RDLKP NLL+ + G VKL DFG AK  D
Sbjct: 458 RDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLD 517


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 48.4 bits (110), Expect = 8e-08
 Identities = 26/63 (41%), Positives = 35/63 (55%)
 Frame = +3

Query: 516 LDSFLSRAPGPLPESRIRSMSHDIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFG 695
           LD+FL    G     ++  M   I SG+ +L     VHRDL   N+LV AA   K+ADFG
Sbjct: 721 LDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFG 780

Query: 696 LAK 704
           L++
Sbjct: 781 LSR 783


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 582 DIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFGLAKTYDVEMKLTSVV 740
           D++ G+ +LHS  +VHRD+K  N+L+    R KL DFG   T +V M L S+V
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCIT-EV-MMLGSIV 755


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +3

Query: 582 DIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFGLAKTYDVEMKLTSVV 740
           D++ G+ +LHS  +VHRD+K  N+L+    R KL DFG   T +V M L S+V
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCIT-EV-MMLGSIV 793


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 45.2 bits (102), Expect = 7e-07
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = +3

Query: 582 DIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKLADFGLAK 704
           +I  G+ FLH   IV+RDLK  N+L+   G +K+ADFG+ K
Sbjct: 93  EIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCK 133


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
 Frame = +3

Query: 585 IISGVDFLHSHRIVHRDLKPHNLLVTAAGR---VKLADFGLA 701
           I+  V   H + +VHRDLKP NLL+ +  +   VKLADFGLA
Sbjct: 18  ILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 59


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 24/64 (37%), Positives = 34/64 (53%)
 Frame = +3

Query: 504 CGQDLDSFLSRAPGPLPESRIRSMSHDIISGVDFLHSHRIVHRDLKPHNLLVTAAGRVKL 683
           CG  L + L  A   +   RI  +   I   + F H+  IVH D+KP N+L++  G+ KL
Sbjct: 139 CGTTLQNRLDEAI-LIKNERICILK-SITCALQFCHNAGIVHADVKPKNILMSKNGQPKL 196

Query: 684 ADFG 695
            DFG
Sbjct: 197 TDFG 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,983
Number of Sequences: 438
Number of extensions: 4492
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)