Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021124
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 268 RSSFKNTSWVSIDKRAIAFSIWTGR 342
           R  F  T W +  +R I F I TGR
Sbjct: 210 RRDFLRTYWSAKRQRDIRFQIATGR 234


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 259 YVYSGHYLFW 230
           Y+YS HY +W
Sbjct: 15  YIYSKHYSYW 24


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 40  ELKIRDFFINIQLIALYTYTLIFFVTYY 123
           E +  D+   +QL+ ++ Y +  F  YY
Sbjct: 131 ESERNDYVSLLQLVFVFCYFIYLFTVYY 158



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 105 IFCYILQTSYVYYV 146
           +FCY +    VYY+
Sbjct: 146 VFCYFIYLFTVYYI 159


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 544 SRSFNQPISGRPPSTRHISY 485
           SRS  QP +GR   TR   Y
Sbjct: 213 SRSKRQPKTGREDQTRRNPY 232


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 265 HDYVYSGHYLFWFT 224
           H+ +YS H L W T
Sbjct: 247 HNSLYSLHLLLWIT 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,782
Number of Sequences: 336
Number of extensions: 4103
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)