Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021124
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0493 + 4113869-4116728,4116859-4117370                           29   4.7  
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975...    28   8.2  

>05_01_0493 + 4113869-4116728,4116859-4117370
          Length = 1123

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 445 LVLGGAVGGGMTLNKKYAEWKVVFQIWAG 531
           L+ GGA+GGG T      EW+V   I  G
Sbjct: 860 LLHGGAMGGGATTTAAVVEWEVRLAIAVG 888


>03_02_0600 -
           9748382-9748933,9749805-9749840,9751164-9751218,
           9751588-9751697,9751955-9752602
          Length = 466

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 647 TSFTESWINLQLITDFIFCCNQCSCKSIPLFIVGEQVI*PAHIWKTTFHS 498
           T+  +    ++L TD +  CN     S  L ++G  ++   H+  + FHS
Sbjct: 361 TAKEKGMARVELETDSLMLCNALQSNSFNLSVMGGVILEIKHVIASCFHS 410


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,608,553
Number of Sequences: 37544
Number of extensions: 397511
Number of successful extensions: 1040
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)