Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021124
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058366-1|AAL13595.1|  933|Drosophila melanogaster GH13793p pro...    68   1e-11
AE013599-1850|AAF58275.2|  972|Drosophila melanogaster CG8479-PA...    68   1e-11
AE013599-1849|AAM70993.1|  933|Drosophila melanogaster CG8479-PB...    68   1e-11

>AY058366-1|AAL13595.1|  933|Drosophila melanogaster GH13793p
           protein.
          Length = 933

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 388 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWK 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWK
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWK 115



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 510 GLPDMGWLNDLLPDNEQWDRFTTTLITAKDKIGDQLQI 623
           GLP+  WL D +P  E+W +F+  LI     + + +++
Sbjct: 117 GLPNFKWLEDAMPQGERWSQFSRNLIEVGSLVKNAIEV 154


>AE013599-1850|AAF58275.2|  972|Drosophila melanogaster CG8479-PA,
           isoform A protein.
          Length = 972

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 388 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWK 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWK
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWK 115



 Score = 58.4 bits (135), Expect = 9e-09
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = +3

Query: 510 GLPDMGWLNDLLPDNEQWDRFTTTLITAKDKIGDQLQIDPRLREAGVARXTELREWLAQR 689
           GLP+  WL D +P  E+W +F+  LI     + + +++DP+L++ G  + +E R W   R
Sbjct: 117 GLPNFKWLEDAMPQGERWSQFSRNLIEVGSLVKNAIEVDPKLKQLGEDKLSEWRNWFDSR 176

Query: 690 YED 698
            +D
Sbjct: 177 LDD 179


>AE013599-1849|AAM70993.1|  933|Drosophila melanogaster CG8479-PB,
           isoform B protein.
          Length = 933

 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = +1

Query: 388 RCYGMLVARAIRGVLKIRYLVLGGAVGGGMTLNKKYAEWK 507
           R YGMLV R +RG LK+RY+VLGGA+GGG++L+KKY EWK
Sbjct: 76  RGYGMLVVRILRGALKLRYIVLGGAIGGGVSLSKKYEEWK 115



 Score = 36.3 bits (80), Expect = 0.040
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 510 GLPDMGWLNDLLPDNEQWDRFTTTLITAKDKIGDQLQI 623
           GLP+  WL D +P  E+W +F+  LI     + + +++
Sbjct: 117 GLPNFKWLEDAMPQGERWSQFSRNLIEVGSLVKNAIEV 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,531,764
Number of Sequences: 53049
Number of extensions: 686525
Number of successful extensions: 1624
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)