Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021122
(721 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 118 2e-25
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 113 3e-24
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 113 4e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 107 2e-22
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 102 8e-21
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 98 2e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 96 7e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 95 1e-18
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 94 3e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 93 6e-18
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 92 1e-17
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 88 2e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 87 3e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 79 1e-13
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 77 3e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 72 1e-11
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 70 5e-11
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 55 2e-06
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 51 2e-05
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 48 2e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 44 0.004
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 44 0.005
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 43 0.007
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.020
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.082
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 36 1.0
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 35 1.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.3
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.3
UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole ge... 34 3.1
UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 4.1
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 33 5.4
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.4
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 5.4
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 7.1
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 7.1
UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep... 33 9.4
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.4
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 9.4
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 118 bits (283), Expect = 2e-25
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
++AA+ +PALV ++GH IE+ P P + K + KTK+AV+ L++LKAW+DI KVY S
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
Q P II+N+D G
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNEDNG 216
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 113 bits (273), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 87.4 bits (207), Expect = 3e-16
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
YKSQ PL++++KD+G
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 113 bits (272), Expect = 4e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 179 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 98 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQ
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 107 bits (258), Expect = 2e-22
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 38 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 42.3 bits (95), Expect = 0.012
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKS---KIINKTKQAVIFLRRLKAWSDILKV 620
++AA+G PAL+ ARGH + P P + + + I KT AV L+ + A +D K
Sbjct: 103 ALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKA 162
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQ 716
S+ PL+I+N D+
Sbjct: 163 KNSRKLRAGKGKLRGRRHKQRRGPLVIYNPDE 194
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 107 bits (258), Expect = 2e-22
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 61 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQ
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
Score = 32.7 bits (71), Expect = 9.4
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PT---KSKIINKTKQAVIFLRRLKAWSDILKV 620
++AA+GVPAL+ ARGH I + P + + + I +T A L+ + A D+ KV
Sbjct: 126 ALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKV 185
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFN 707
S+ PL++++
Sbjct: 186 KDSRKLRAGKGKLRGRRHRQRRGPLVVYD 214
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 102 bits (245), Expect = 8e-21
Identities = 45/55 (81%), Positives = 46/55 (83%)
Frame = +1
Query: 241 GGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 405
G TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 251 HQ 256
++
Sbjct: 60 YE 61
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/90 (31%), Positives = 42/90 (46%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
S+AA+G+ +LV ARGH I P + + + KTK A+ FL L ++ ++ KS
Sbjct: 127 SIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKS 186
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
PLII++ D G
Sbjct: 187 XKLRARXGKMRNRKYKISNGPLIIYSXDSG 216
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/90 (26%), Positives = 43/90 (47%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
++AA+ VP+LV +RGH I P P + + KTK+A+ FL+ + A D+ +V S
Sbjct: 126 ALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDS 185
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
+ P+++ ++G
Sbjct: 186 REIRAGRGKMRNRRYVARRGPMLVMPNNKG 215
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 96.3 bits (229), Expect = 7e-19
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 396
+A + + G+ TSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQ-TSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 397 RRWH 408
RRWH
Sbjct: 108 RRWH 111
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 83 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+Q
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
Score = 37.5 bits (83), Expect = 0.33
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AAT V +V +RGH IE P + + INKTK AV L + +++ ++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRI 182
Query: 621 YK 626
K
Sbjct: 183 DK 184
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/50 (82%), Positives = 41/50 (82%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 64 SAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWH 113
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 86 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQ 62
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/85 (31%), Positives = 41/85 (48%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
+VAATG+ LV ARGH I + P P + K + KT A+ FL+R A+ D+ KV +
Sbjct: 128 AVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVST 187
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIF 704
+ PL+++
Sbjct: 188 KVVRAGISKQRGKKYRVRKGPLVVY 212
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 94.3 bits (224), Expect = 3e-18
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 396
+A + G+ TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQ-TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 397 RRWH 408
R WH
Sbjct: 108 RHWH 111
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 77 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Score = 36.3 bits (80), Expect = 0.76
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L SVAAT LV +RGH +E P P + + + KT+ AV L + ++ +V
Sbjct: 123 LAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRV 182
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 93.1 bits (221), Expect = 6e-18
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 64 SAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 251 HQ 256
HQ
Sbjct: 61 HQ 62
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRL-KAWSDILK 617
+ ++AATG P+LV ARGH I P P + + + INKT AV F + K + +K
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMK 184
Query: 618 -VYKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
+ S PL+++ +D G
Sbjct: 185 RIESSIAIRCGKGKMRNRRRVCAVGPLVVYAEDNG 219
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 87.8 bits (208), Expect = 2e-16
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 405
SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 60 SAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 40.3 bits (90), Expect = 0.047
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +2
Query: 92 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQ 58
Score = 36.3 bits (80), Expect = 0.76
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
+VAA+ +LV+ARGH I P + KTK AV LR L ++ +V KS
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKS 183
Query: 630 Q 632
+
Sbjct: 184 R 184
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 87.4 bits (207), Expect = 3e-16
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 63 SAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDI 611
++AA+ P+LV ARGH I+ P P + + I KTK+AV L LKA D+
Sbjct: 127 AIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDV 180
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 89 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 79.0 bits (186), Expect = 1e-13
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 405
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 453 VAATGVPALVQARGHIIEKFPSFPWL*PTKS-KIINKTKQAVIFLRRLKAWSDILKVYKS 629
+AA+ VPALV ARGH I P P + +KS +I KTKQAV L+++ A+SD+LKV S
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIAS 187
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKD 713
+ PL+++ D
Sbjct: 188 KTVRAGQGKMRGRKIKERKGPLVVYGND 215
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQ 61
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +3
Query: 489 RGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXX 668
RG++++ P + K + INKTKQAVIFLRR+KAWSD+LKVYKSQ
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 669 XXXXXXXPLIIFNKDQG 719
PLII+NKDQG
Sbjct: 65 RRLHRKGPLIIYNKDQG 81
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 64 SAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/49 (61%), Positives = 35/49 (71%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 405
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 60 SAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/104 (28%), Positives = 50/104 (48%)
Frame = +3
Query: 408 PSRQPPTAESGLGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLR 587
PSRQ A + ++AAT V LVQARGH++ + P + + I +T+ AV L+
Sbjct: 113 PSRQRKFA---IASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLK 169
Query: 588 RLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
++ + D+ +V PL+I+N+D+G
Sbjct: 170 KVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKKGPLVIYNEDKG 213
Score = 40.3 bits (90), Expect = 0.047
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +2
Query: 77 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAG 56
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/90 (32%), Positives = 48/90 (53%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
++AA+ VP+L+ ARGH +E P P + + I KT +AV L++L A++DI KV S
Sbjct: 130 AIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKAS 189
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
+ PL+++++D G
Sbjct: 190 RNVRSGKGKMRNRRYVQRRGPLVVYSEDNG 219
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 128 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 214
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 405
+A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 59 TAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +2
Query: 86 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
Score = 38.7 bits (86), Expect = 0.14
Identities = 24/91 (26%), Positives = 42/91 (46%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
+ ++AA+ ALV+ARGH I PS P + T + + KTK A+ ++ + D+ +
Sbjct: 114 VASALAASANAALVEARGHRIADVPSIPLVVDTDN--VTKTKDALAIIKAVGVLRDVERC 171
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKD 713
S+ PL+I+N +
Sbjct: 172 KDSRHIRAGRGKMRNRRYITRKGPLVIYNTE 202
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 486 ARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKSQ 632
++GH I + P P + K + KT++AV+ L++LKAW+DI KVY SQ
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQ 50
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/95 (23%), Positives = 44/95 (46%)
Frame = +3
Query: 435 SGLGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDIL 614
+ L ++AAT P V+ RGH+I+ P P + + K +NK ++ F + + W+D+
Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVE 175
Query: 615 KVYKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
+ ++ LI+ ++D+G
Sbjct: 176 RAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDEDEG 210
Score = 41.1 bits (92), Expect = 0.027
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 405
TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 56 TSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 86 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAG 53
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1
Query: 193 SRFYVQELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGGG 321
S + + + + E G+ TSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGYQ-TSAESWGTGRARGPMPRVRGGG 73
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 558 KTKQAVIFLRRLKAWSDILKVYKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
KTK+ V+ L++LKAW+DI KVY SQ II+N+D G
Sbjct: 104 KTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Score = 36.7 bits (81), Expect = 0.58
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
D+VN VH ++ KN QPY VS+ AG+Q
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDI 611
++AAT + V ARGH++EK PS P + ++ IN+ K+A L W D+
Sbjct: 144 AIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDV 197
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
+G S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +3
Query: 318 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 422
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 39.5 bits (88), Expect = 0.082
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 390
TSA S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 69 TSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 399
R QGG P A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 292 ARIPRVRGGGTHRSGQGAFGNMCRGG 369
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 372
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/90 (21%), Positives = 37/90 (41%)
Frame = +3
Query: 450 SVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKVYKS 629
++AAT LV+ RGH + + P++ + + + TK+ + L DI++ K
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKG 176
Query: 630 QXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
+ PL++ D+G
Sbjct: 177 RKIKSGKGKLRGRKYRTPKGPLVVVGNDRG 206
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 390
T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 57 TTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 364 HDTCYRRHPDRTYEYHHHGHAEFGRQH 284
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 277 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 390
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_A7QMM2 Cluster: Chromosome chr19 scaffold_126, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_126, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 2025
Score = 34.3 bits (75), Expect = 3.1
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +1
Query: 79 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPT 258
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1937 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1993
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQG 342
G GRA+ R VR GG R+G+G
Sbjct: 1994 VGR--GRGRAITRGRGVR-GGRGRAGRG 2018
>UniRef50_A5AYB9 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1491
Score = 34.3 bits (75), Expect = 3.1
Identities = 29/88 (32%), Positives = 41/88 (46%)
Frame = +1
Query: 79 SPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGWSPT 258
S VGV ++ G+ A P V+ A P G + + A+LR+ G SP+
Sbjct: 1403 STVVDVGVSKQ---GSPTVPADPEEVKQALPVGSSSTTINLQERARQRAMLRQAGVLSPS 1459
Query: 259 SAESWGTGRAVARIPRVRGGGTHRSGQG 342
G GRA+ R VR GG R+G+G
Sbjct: 1460 VGR--GRGRAITRGRGVR-GGRGRAGRG 1484
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 373 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 260
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 33.5 bits (73), Expect = 5.4
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -1
Query: 466 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 290
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 289 QHVQYPMIQH-WLVTSLLAHAVGLPRVLGHRN 197
H P H TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 376 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 260
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 5.4
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +3
Query: 279 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 443
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 444 GGSVAATGVPA 476
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.1 bits (72), Expect = 7.1
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 349 RRHPDRTYEYHHHGHAEFGRQHVQ-YP 272
R PD + +HHHGH G HV+ YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.1 bits (72), Expect = 7.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 208 QELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGGG 321
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep:
AsmA precursor - Delftia acidovorans SPH-1
Length = 791
Score = 32.7 bits (71), Expect = 9.4
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +3
Query: 279 WTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVA 458
WT RP S P W + + V W VR A L QPP+ + G V
Sbjct: 275 WTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQPPSPDFPYGMRVG 334
Query: 459 ATG--VPALVQARGHI 500
TG A V+A+G I
Sbjct: 335 LTGRIAKATVEAQGLI 350
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 379 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 287
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 9.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 401 VGTVASTSDSGERPWRQRCCYRRPSARS 484
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,746,349
Number of Sequences: 1657284
Number of extensions: 14238569
Number of successful extensions: 47813
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47324
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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