Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021122
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 113 2e-25
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 113 2e-25
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 113 2e-25
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 113 2e-25
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 113 2e-25
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 31 1.2
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 31 1.2
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 31 1.2
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 31 1.2
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.1
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.1
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.1
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.8
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.8
AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p pro... 29 8.4
AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p pro... 29 8.4
AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-P... 29 8.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 113 bits (273), Expect = 2e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 87.4 bits (207), Expect = 2e-17
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
YKSQ PL++++KD+G
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 113 bits (273), Expect = 2e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 3 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53
Score = 68.9 bits (161), Expect = 6e-12
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILK 617
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI K
Sbjct: 65 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQK 123
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 113 bits (273), Expect = 2e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 87.4 bits (207), Expect = 2e-17
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
YKSQ PL++++KD+G
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 113 bits (273), Expect = 2e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 87.4 bits (207), Expect = 2e-17
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
YKSQ PL++++KD+G
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 113 bits (273), Expect = 2e-25
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 408
TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 87.4 bits (207), Expect = 2e-17
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +3
Query: 441 LGGSVAATGVPALVQARGHIIEKFPSFPWL*PTKSKIINKTKQAVIFLRRLKAWSDILKV 620
L ++AA+GVPALVQ++GH+I+ FP + + + + KTKQAVIFLRRLK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 621 YKSQXXXXXXXXXXXXXXXXXXXPLIIFNKDQG 719
YKSQ PL++++KD+G
Sbjct: 187 YKSQRFRAGRGTMRDRRRIARRGPLVVYDKDEG 219
Score = 80.2 bits (189), Expect = 3e-15
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 918 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 369
+GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 282 TCCRP-NSACPWWWYS*VRSGC 344
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 183
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 70 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 183
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AY071692-1|AAL49314.1| 493|Drosophila melanogaster RH13838p
protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AY071544-1|AAL49166.1| 493|Drosophila melanogaster RE57978p
protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
>AE014297-3534|AAF56288.3| 493|Drosophila melanogaster CG18528-PA
protein.
Length = 493
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 152 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQPVLNHGVLDVLSPEF 301
+F RPD+ D+ ++ SK C+ + GH + +LDV+ +F
Sbjct: 442 IFLRDYRPDVYPDMAIAASKLRNSVRCIERITGH--ISCEDILDVVFKDF 489
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,989,336
Number of Sequences: 53049
Number of extensions: 691409
Number of successful extensions: 3842
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3694
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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